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Australian Journal of Chemistry Australian Journal of Chemistry Society
An international journal for chemical science
Australian Journal of Chemistry

Australian Journal of Chemistry

Volume 73 Number 4 2020

Dedication to Professor Paul Alewood

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This article will discuss the history behind the uses of faecal material, particularly its role in medical diagnosis. Faecal proteomics and other omics technologies (proteogenomics) are reviewed, including studies on the microbiome, in order to understand, identify, and treat diseases of the gastrointestinal tract and assist the drive towards personalized medicine.

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Designer leptin receptor agonist and antagonist peptides with their expanded chemical space as well as well controllable receptor binding and elimination properties slowly replace full-sized leptin products in the drug development pipeline.

CH19414Natural Inhibitors of Snake Venom Metalloproteinases

Narumi Aoki-Shioi 0000-0001-8326-6856, Cho Yeow Koh and R. Manjunatha Kini
pp. 277-286
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Snake venom metalloproteinases (SVMPs) are responsible for the severe haemorrhage observed in the victims of snakebite envenoming. Natural inhibitors from medicinal plans and animal venoms are sought to block the pharmacological functions of SVMPs. In this review, to understand their inhibitory mechanisms, we focussed on the complex structures of these inhibitors and SVMPs.

CH19658Discovery of Cyclotides from Australasian Plants

Meng-Wei Kan 0000-0001-8189-834X and David J. Craik 0000-0003-0007-6796
pp. 287-299
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This article highlights the rich diversity of peptides discovered from Australasian plants and animals, both terrestrial and marine. These peptides are typically highly stable and selective and have formed the basis of novel drug leads and eco-friendly pesticides. Such peptides offer great potential as next generation medicines and crop protection agents.

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The antibody-like properties of molecularly imprinted polymers offer promise in application areas ranging from separation and sensor development to proteomics and therapeutics. The recent development of peptide and protein imprinted polymers in nanoparticle formats is facilitating progress in these areas.

CH19392The Effects of Lipidation on a TAT-Containing Peptide-Based Inhibitor of PSD-95

Eduardo F. A. Fernandes, Linda M. Haugaard-Kedström and Kristian Strømgaard 0000-0003-2206-4737
pp. 307-311
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We synthesised and evaluated combining lipidation and conjugation to the cell-penetrating peptide TAT to increase peptide stability and brain permeability in vivo. Even though TAT–lipid combinations were stable in vivo and in vitro and permeated to the brain, they were haemolytic and resulted in acute toxic effects in vivo.

CH19386The Single Disulfide-Directed β-Hairpin Fold: Role of Disulfide Bond in Folding and Effect of an Additional Disulfide Bond on Stability

Balasubramanyam Chittoor, Bankala Krishnarjuna, Rodrigo A. V. Morales and Raymond S. Norton
pp. 312-320
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A novel peptide scaffold, contryphan-Vc1, with a single disulfide-directed β-hairpin (SDH) fold, has been shown to possess remarkable thermal and chemical stability, but limited proteolytic stability. In this study, we engineered the peptide by introducing a second disulfide bond that maintained the native fold and enhanced proteolytic stability.

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A designed enzyme containing an artificial catalytic apparatus with tuneable electronic properties was prepared by chemical synthesis in order to investigate electronic effects in enzyme catalysis. A prototype of the enzyme accelerated peptide bond hydrolysis by ∼108-fold. This novel approach will enable systematic investigation of electronic effects in enzyme catalysis.

CH19456On-Resin Strategy to Label α-Conotoxins: Cy5-RgIA, a Potent α9α10 Nicotinic Acetylcholine Receptor Imaging Probe

Markus Muttenthaler, Simon T. Nevin, Marco Inserra, Richard J. Lewis, David J. Adams and Paul F. Alewood
pp. 327-333
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Venom toxins are potent and selective peptides used as pharmacological tools to study complex signalling systems. Here, we established a versatile on-resin strategy to label peptides with a Cy5 fluorophore. Specifically, we labelled conotoxin α-RgIA, demonstrated its nanomolar binding to the α9α10 nicotinic acetylcholine receptors, and used it to visualise these in a macrophage cell line.

CH19530From JMV-1843 to Macrilen

Jean Martinez and Jean-Alain Fehrentz
pp. 334-337
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JMV-1843 (tradename Macrilen) is a modified tripeptide, which stimulates the release of growth hormone (GH) by interacting with the ghrelin receptor. Macrilen is the first orally available compound commercialised for diagnosing adult growth hormone deficiency (AGHD). The test appears to be reliable, well tolerated, and simple. The story of JMV-1843 in the laboratory to Macrilen in the market is summarised.

CH19567Trachycladindoles H–M: Molecular Networking Guided Exploration of a Library of Southern Australian Marine Sponges

Shamsunnahar Khushi, Laizuman Nahar, Angela A. Salim and Robert J. Capon 0000-0002-8341-7754
pp. 338-343
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A molecular networking strategy fast-tracked the discovery of trachycladindoles H–M (813), new examples of a rare class of indole alkaloid with promising kinase inhibitory properties, from a Great Australian Bight deep-water sponge, Geodia sp.

CH19479High Cell Permeability Does Not Predict Oral Bioavailability for Analogues of Cyclic Heptapeptide Sanguinamide A

Daniel S. Nielsen, Rink-Jan Lohman 0000-0001-6387-0992, Huy N. Hoang 0000-0002-7124-6097, David P. Fairlie 0000-0002-7856-8566 and Timothy A. Hill 0000-0001-9727-9930
pp. 344-351
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Three cyclic peptides, reported to have high cell membrane permeability, show low oral bioavailability and high clearance rates in this study. NMR, molecular dynamics, and circular dichroism studies reveal that higher flexibility correlates with improved permeability but also results in metabolic instability that limits the oral bioavailability of the compounds.

CH19524Phenol as a Modulator in the Chemical Reactivity of 2,4,6-Trichloro-1,3,5-triazine: Rules of the Game II

Rotimi Sheyi, Anamika Sharma, Ayman El-Faham, Beatriz G. de la Torre and Fernando Albericio 0000-0002-8946-0462
pp. 352-356
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Preferential incorporation of nucleophiles onto TCT was found to be first phenol, second thiol and third amine. Phenol incorporation was achieved at −20°C which helped to replace the third ‘Cl’ at 35°C, which is compatible with a biological context. Atomic charges on ‘Cl’ (NBO calculations) were consistent with the experimental findings.

CH19588Venomic Interrogation Reveals the Complexity of Conus striolatus Venom

S. W. A. Himaya, Subash K. Rai, Giulia Pamfili, Ai-Hua Jin, Paul F. Alewood and Richard J. Lewis 0000-0003-3470-923X
pp. 357-365
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One hundred and fifty-eight conotoxins were identified in the venom transcriptome of the little studied C. striolatus from the fish hunting clade Pionoconus. Preferential expression in proximal versus distal duct suggested that its complex predatory venom may be expressed at multiple sites along the venom duct.

CH20042Scandium(III) Triflate as a Lewis Acid Catalyst of Oxime Ligation

Philip A. Cistrone, Anouk Dirksen, Sampat Ingale and Philip E. Dawson 0000-0002-2538-603X
pp. 377-379
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The formation of oxime linkages between complex and precious biomolecules is of great interest to basic research and pharmaceutical applications alike. In this work, we employ the water-stable Lewis acid Sc(OTf)3 as a co-catalyst with ortho-phenylenediamine in the oxime ligation to yield up to an order of magnitude rate enhancement over the catalysts when applied individually.

CH20043Efficient Flow Synthesis of Human Antimicrobial Peptides

John S. Albin 0000-0001-6523-7744 and Bradley L. Pentelute 0000-0002-7242-801X
pp. 380-388
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Antimicrobial peptides (AMPs) may serve as lead compounds for new classes of antibiotics. Therapeutic development is hampered, however, by an incomplete understanding of their functions. To facilitate systematic comparisons of AMP functions, we describe here methods for the efficient flow synthesis and purification of human AMPs.

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