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Australian Journal of Chemistry Australian Journal of Chemistry Society
An international journal for chemical science
Australian Journal of Chemistry

Australian Journal of Chemistry

Volume 73 Numbers 2 & 3 2020

Dedication to Professor Frances Separovic

CH19335Chemical Modification of Cellulose Membranes for SPOT Synthesis

Wenyi Li 0000-0003-3584-0301, John D. Wade 0000-0002-1352-6568, Eric Reynolds 0000-0002-6618-4856 and Neil M. O'Brien-Simpson 0000-0001-8462-5603
pp. 78-84
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SPOT synthesis is one of the popular strategies to prepare peptide arrays. The critical factor for a successful SPOT synthesis is cellulose membrane modification and functionalization. Here, we highlight the current modifications of cellulose to facilitate SPOT synthesis and its contribution to the discovery of novel peptide mimetics and therapeutics.

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Phagocytosis is a mechanism of internalization of large particles, microorganisms, and cellular debris for intracellular degradation. The material can be up to several micrometres in size and therefore represents a significant mechanical undertaking on the part of the cell. Recent mechanical studies of cell-generated forces of phagocytes are the subject of this review.

CH19397Review of Mutarotase in ‘Metabolic Subculture’ and Analytical Biochemistry: Prelude to 19F NMR Studies of its Substrate Specificity and Mechanism

Dmitry Shishmarev 0000-0002-0724-0002, Lucas Quiquempoix, Clément Q. Fontenelle 0000-0002-1630-3407, Bruno Linclau and Philip W. Kuchel 0000-0003-4100-7332
pp. 112-116
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Mutarotase (aldose 1-epimerase; EC 5.1.3.3) catalyses the rapid exchange between the α- and β-anomers of d-glucose and some other monosaccharides. We summarise current knowledge of its involvement in metabolism, and its molecular mechanism. Its substrate specificity is considered in relation to fluorinated glucose analogues reported on in the following paper.

CH19562Anomerisation of Fluorinated Sugars by Mutarotase Studied Using 19F NMR Two-Dimensional Exchange Spectroscopy

Dmitry Shishmarev 0000-0002-0724-0002, Lucas Quiquempoix, Clément Q. Fontenelle 0000-0002-1630-3407, Bruno Linclau and Philip W. Kuchel
pp. 117-128
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Two-dimensional exchange NMR spectroscopy detected rapid anomerisation of 4-fluoro-4-deoxy-d-glucose in the presence of the enzyme mutarotase. We measured the exchange rate constants and inhibition of this reaction by d-glucose and other fluorinated analogues. Implications for studies of the in situ kinetics of these glucose analogues in cells and tissues are discussed.

CH19227A Sesquiterpene Isonitrile with a New Tricyclic Skeleton from the Indo-Pacific Nudibranch Phyllidiella pustulosa: Spectroscopic and Computational Studies

Desmond C.-M. Sim, Natasha L. Hungerford, Elizabeth H. Krenske, Gregory K. Pierens, Katherine T. Andrews, Tina S. Skinner-Adams and Mary J. Garson
pp. 129-136
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9-Isocyanoneoallopupukeanane 1, a novel tricyclic sesquiterpene isonitrile possessing a unique tricyclo[5.2.1.04,8]decane skeleton, was isolated from the Indo-Pacific nudibranch Phyllidiella pustulosa. The structure of 1 was investigated by NMR experiments together with molecular modelling studies and density functional calculations. The viability of a biosynthetic pathway leading to 1 is presented, and 1 exhibited micromolar antimalarial activity towards Plasmodium falciparum infected erythrocytes.

CH19326Incorporation of Vanadium and Molybdenum into Yttrium-Arsenotungstates Supported by Amino Acid Ligands

Fateme Akhlaghi Bagherjeri, Chris Ritchie, Robert W. Gable, Gary Bryant and Colette Boskovic
pp. 137-144
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Vanadium(iv) ions are site-selectively incorporated into a family of yttrium-arsenotungstates with amino acid ligands. The vanadium(iv) ions occupy metal sites in the oxo-bridged tetrametallic core of the polyoxometalate, in preference to molybdenum(v).

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Superoxide dismutase (SOD) is an almost ubiquitous metalloenzyme that catalyses the disproportionation of superoxide (O2) to molecular oxygen (O2) and hydrogen peroxide (H2O2). The crystal structure of the manganese SOD from Geobacillus stearothermophilus was determined many years ago but the final structure, completed with modern processing and analysis tools, has only just been made available.

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Rifampicin loaded PLGA nanoparticles were synthesised using a microfluidic assisted nanoprecipitation method. The effects of stabiliser and lipid additives on nanoparticle morphology, drug encapsulation efficiency, release kinetics, and antimicrobial activity are explored.

CH19357Nuclear Magnetic Resonance Study of the Peptide FRANCESSEPAROVIC

John A. Karas, David W. Keizer and Marc-Antoine Sani 0000-0003-3284-2176
pp. 158-163
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As an eminent ambassador of STEM and renowned NMR spectroscopist, Frances Separovic is an internationally famous name, but could it also be a valuable membrane-active peptide sequence? Frances’ name has been used as an amino acid sequence (FS), and its structure in micelles and whether FS is interacting with neutral anionic lipid bilayers were investigated using Frances’ favourite biophysical technique, NMR spectroscopy.

CH19361What are the Potential Sites of DNA Attack by N-Acetyl-p-benzoquinone Imine (NAPQI)?

Siqi Li, Michael G. Leeming and Richard A. J. O'Hair 0000-0002-8044-0502
pp. 180-188
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N-Acetylbenzoquinone imine (NAPQI), the electrophilic metabolite of paracetamol (APAP), reacts with deoxyguanosine (dG), deoxyadenosine (dA), and deoxycytidine (dC) but not deoxythymidine (dT) to form covalent adducts as evidenced by LC-MS experiments.

CH19423A Visible Light Photoredox Catalysed Radical Pictet-Spengler Reaction

Theerada Seehamongkol, Tyra H. Horngren, Mohammed A. M. Alhajji, Joshua Almond-Thynne, Milena L. Czyz, Anthony J. Barrett and Anastasios Polyzos
pp. 189-194
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The discovery of a reaction methodology enabling a radical variant of the classical Pictet–Spengler reaction is reported. This strategy furnishes tetrahydroisoquinoline derivatives bearing electron poor and electron rich substituents via photoredox catalysis. The reaction proceeds at room temperature, with blue-light irradiation and with excellent regioselectivity for the 6-endo intramolecular cyclisation.

CH19500The Effect of Charge on Melittin-Induced Changes in Membrane Structure and Morphology

Tzong-Hsien Lee, Kristopher Hall and Marie-Isabel Aguilar
pp. 195-201
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The binding of melittin to different phospholipid bilayers was studied using dual polarisation interferometry and atomic force microscopy. Melittin caused significant disruption on all bilayers, but the results demonstrate that membrane disruption follows distinct structural changes for different lipid mixtures irrespective of the strength of binding to the membrane surface.

CH19461Phote-HrTH (Phormia terraenovae Hypertrehalosaemic Hormone), the Metabolic Hormone of the Fruit Fly: Solution Structure and Receptor Binding Model

Ibrahim A. Abdulganiyyu, Marc-Antoine Sani 0000-0003-3284-2176, Frances Separovic, Heather Marco and Graham E. Jackson
pp. 202-211
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The supply of fuel for flight of the fruit fly pest is regulated by the adipokinetic hormone (AKH), Phote-HrTH. Thus, its receptor is a suitable target for the development of eco-friendly pesticides. In this paper we report the solution structure of the hormone and receptor. Docking and identification of the ligand binding site is reported.

CH19526Syntheses and Binding Testing of N1-Alkylamino-Substituted 2-Aminobenzimidazole Analogues Targeting the Hepatitis C Virus Internal Ribosome Entry Site

David Schmit, Urszula Milewicz, Mark A. Boerneke, Scott Burley, Kevin Walsworth, Joann Um, David Hecht, Thomas Hermann and B. Mikael Bergdahl 0000-0002-7104-927X
pp. 212-221
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A class of 2-aminobenzimidazole analogues that target the IRES of the HCV-RNA have been synthesised and tested against binding correlated with in silico docking experiments. Analogues showed promising SAR to an HCV RNA-IRES construct (EC50: 21-89 µM). These data provide initial information to propose future inhibitors for selective HCV RNA translation.

CH19577The Conformations of Virginiamycin M1 Diacetate, an Inhibitor of Guinea Pig Brain CCK-B Receptors, in Selected Solvents

Kevin Walsworth, Anastasiya Bender, Frances Separovic 0000-0002-6484-2763, B. Mikael Bergdahl 0000-0002-7104-927X and Robert P. Metzger 0000-0002-5189-5831
pp. 230-235
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Proposed 3D conformations of Virginiamycin-14,16-diacetate in chloroform and methanol are shown and the implications discussed. The proposed structure of VM1-diAc in CDCl3 solution is similar to Virginiamycin M1 (VM1) binding to the ribosome, while in methanol, a protic medium, the proposed structure for VM1-diAc differs greatly from that of the VM1 binding to the 50s ribosome shown by X-ray crystallography.

CH19429Mechanisms of a Small Membrane-Active Antimicrobial Peptide from Hyla punctata

Charles H. Chen 0000-0001-7695-5215, Jakob P. Ulmschneider and Martin B. Ulmschneider
pp. 236-245
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Our study suggests that lipid chemistry and membrane rigidity are key to preventing HSP1 from binding onto membranes, and the lipid headgroup charge may further promote peptide folding in the membrane. Our experiment-validated MD simulations suggest a carpet-like model mechanism for HSP1 through peptide binding, folding, aggregation, and assembly.

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