Microbial diversity and activity in caves
Eric M Adetutu and Andrew S Ball
+ Author Affiliations
- Author Affiliations
School of Applied Sciences
RMIT University
PO Box 71
Vic 3083, Australia
Tel: +61 3 9925 7122
Fax: +61 3 9925 7110
Email: eric.adetutu@rmit.edu.au
Microbiology Australia 35(4) 192-194 https://doi.org/10.1071/MA14062
Published: 30 October 2014
Abstract
In recent times, there have been renewed interests in cave ecosystems for both economic and scientific reasons. This is because caves can contain fossils, artifacts, Palaeolithic paintings, ancient markings in form of finger flutings and beautiful speleothems (mineral deposits). These features are attractive and their presence has led to an increase in the number of people visiting caves (tourism) with associated economic benefits to the cave management authorities and the communities in which these caves are located. Unfortunately some of these cave features are susceptible to microbial damage by indigenous and foreign microorganisms, with this risk being exacerbated by unregulated human visitation. Therefore understanding microbial diversity and activities in caves is essential for cave conservation, restoration, safe and sustainable cave tourism.
References
[1] Pulido-Bosch, A. et al. (1997) Human impact in a tourist karstic cave (Aracena, Spain). Environ. Geol. 31, 142–149.| Human impact in a tourist karstic cave (Aracena, Spain).Crossref | GoogleScholarGoogle Scholar |
[2] Shapiro, J. and Pringle, A. (2010) Anthropogenic influences on the diversity of fungi isolated from caves in Kentucky and Tennessee. Am. Midl. Nat. 163, 76–86.
| Anthropogenic influences on the diversity of fungi isolated from caves in Kentucky and Tennessee.Crossref | GoogleScholarGoogle Scholar |
[3] Jurado, V. et al. (2010) Pathogenic and opportunistic microorganisms in caves. Int. J. Speleol. 39, 15–24.
| Pathogenic and opportunistic microorganisms in caves.Crossref | GoogleScholarGoogle Scholar |
[4] Adetutu, E.M. et al. (2012) Bacterial community survey of sediments at Naracoorte Caves, Australia. Int. J. Speleol. 41, 137–147.
| Bacterial community survey of sediments at Naracoorte Caves, Australia.Crossref | GoogleScholarGoogle Scholar |
[5] Adetutu, E.M. et al. (2011) Phylogenetic diversity of fungal communities in areas accessible and not accessible to tourists in Naracoorte Caves. Mycologia 103, 959–968.
| Phylogenetic diversity of fungal communities in areas accessible and not accessible to tourists in Naracoorte Caves.Crossref | GoogleScholarGoogle Scholar | 21642344PubMed |
[6] Hutchens, E. et al. (2004) Analysis of methanotrophic bacteria in Movile Cave by stable isotope probing. Environ. Microbiol. 6, 111–120.
| Analysis of methanotrophic bacteria in Movile Cave by stable isotope probing.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD2cXhvV2rs7o%3D&md5=dcec4ebcb667be764e8af9417e27fe13CAS | 14756876PubMed |
[7] Gherman, V.D. et al. (2014) An acidophilic bacterial-archaeal-fungal ecosystem linked to formation of ferruginous crusts and stalactites. Geomicrobiol. J. 31, 407–418.
| An acidophilic bacterial-archaeal-fungal ecosystem linked to formation of ferruginous crusts and stalactites.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3sXhslWhsbbN&md5=2347802aea4090a9fc90e11cd2d22671CAS |
[8] Groth, P.S. et al. (2001) Geomicrobiological study of the Grotta dei Cervi, Porto Badisco, Italy. Geomicrobiol. J. 18, 241–258.
| Geomicrobiological study of the Grotta dei Cervi, Porto Badisco, Italy.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD3MXmvFKkurg%3D&md5=38e39754fbea98ef820daf4387401a8eCAS |
[9] Saiz-Jimenez, C. (2012) Microbiological and environmental issues in show caves. World J. Microbiol. Biotechnol. 28, 2453–2464.
| Microbiological and environmental issues in show caves.Crossref | GoogleScholarGoogle Scholar |
[10] Schabereiter‐Gurtner, C. et al. (2004) Phylogenetic diversity of bacteria associated with Paleolithic paintings and surrounding rock walls in two Spanish caves (Llonin and La Garma). FEMS Microbiol. Ecol. 47, 235–247.
| Phylogenetic diversity of bacteria associated with Paleolithic paintings and surrounding rock walls in two Spanish caves (Llonin and La Garma).Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD2cXhtFWgurs%3D&md5=310c703173a232e72dffff094278c292CAS | 19712338PubMed |
[11] Holmes, A.J. et al. (2001) Phylogenetic structure of unusual aquatic microbial formations in Nullarbor caves, Australia. Environ. Microbiol. 3, 256–264.
| Phylogenetic structure of unusual aquatic microbial formations in Nullarbor caves, Australia.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD3MXkt1SisL4%3D&md5=ae9d546f07fd4dc2f127af29e6570b66CAS | 11359511PubMed |
[12] Kumaresan, D. et al. (2014) Microbiology of Movile Cave—a chemolithoautotrophic ecosystem. Geomicrobiol. J. 31, 186–193.
| Microbiology of Movile Cave—a chemolithoautotrophic ecosystem.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC2cXitlSjsbY%3D&md5=3ac90863b8b8442ee76a68865c90191dCAS |
[13] Vanderwolf, K.J. et al. (2013) A world review of fungi, yeasts, and slime molds in caves. Int. J. Speleol. 42, 77–96.
| A world review of fungi, yeasts, and slime molds in caves.Crossref | GoogleScholarGoogle Scholar |
[14] Minnis, A.M. and Lindner, D.L. (2013) Phylogenetic evaluation of Geomyces and allies reveals no close relatives of Pseudogymnoascus destructans, comb. nov., in bat hibernacula of eastern North America. Fungal Biol. 117, 638–649.
| Phylogenetic evaluation of Geomyces and allies reveals no close relatives of Pseudogymnoascus destructans, comb. nov., in bat hibernacula of eastern North America.Crossref | GoogleScholarGoogle Scholar | 24012303PubMed |
[15] Jurado, V. et al. (2008) Entomogenous fungi and the conservation of the cultural heritage: a review. Int. Biodeterior. Biodegradation 62, 325–330.
| Entomogenous fungi and the conservation of the cultural heritage: a review.Crossref | GoogleScholarGoogle Scholar |
[16] Bastian, F. et al. (2009) The impact of arthropods on fungal community structure in Lascaux Cave. J. Appl. Microbiol. 106, 1456–1462.
| The impact of arthropods on fungal community structure in Lascaux Cave.Crossref | GoogleScholarGoogle Scholar | 1:STN:280:DC%2BD1MzgsVejug%3D%3D&md5=f124127273ee51cb514865538e75404cCAS | 19210566PubMed |
[17] Bastian, F. et al. (2010) The microbiology of Lascaux Cave. Microbiology 156, 644–652.
| The microbiology of Lascaux Cave.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3cXktFOks7k%3D&md5=d3c4c7ee817c0610849bcc4e983e5772CAS | 20056706PubMed |
[18] Martin-Sanchez, P.M. et al. (2012) Use of biocides for the control of fungal outbreaks in subterranean environments: the case of the Lascaux Cave in France. Environ. Sci. Technol. 46, 3762–3770.
| Use of biocides for the control of fungal outbreaks in subterranean environments: the case of the Lascaux Cave in France.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC38XjtVGhs70%3D&md5=70ca281eea7d0a186e595dbad84075acCAS | 22380699PubMed |
[19] Legatzki, A. et al. (2011) Bacterial and archaeal community structure of two adjacent calcite speleothems in Kartchner Caverns, Arizona, USA. Geomicrobiol. J. 28, 99–117.
| Bacterial and archaeal community structure of two adjacent calcite speleothems in Kartchner Caverns, Arizona, USA.Crossref | GoogleScholarGoogle Scholar |
[20] Northup, D.E. et al. (2003) Diverse microbial communities inhabiting ferromanganese deposits in Lechuguilla and Spider Caves. Environ. Microbiol. 5, 1071–1086.
| Diverse microbial communities inhabiting ferromanganese deposits in Lechuguilla and Spider Caves.Crossref | GoogleScholarGoogle Scholar | 14641587PubMed |
[21] Li, L. et al. (2010) Bat guano virome: predominance of dietary viruses from insects and plants plus novel mammalian viruses. J. Virol. 84, 6955–6965.
| Bat guano virome: predominance of dietary viruses from insects and plants plus novel mammalian viruses.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3cXhtVWls7vM&md5=260a572f647588128aac8ceebd77b161CAS | 20463061PubMed |
[22] Lacanette, D. et al. (2013) A laboratory cave for the study of wall degradation in rock art caves: an implementation in the Vézère area. J. Archaeol. Sci. 40, 894–903.
| A laboratory cave for the study of wall degradation in rock art caves: an implementation in the Vézère area.Crossref | GoogleScholarGoogle Scholar |
[23] Valladas, H. et al. (2001) Palaeolithic paintings: evolution of prehistoric cave art. Nature 413, 479.
| Palaeolithic paintings: evolution of prehistoric cave art.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD3MXnsFyisbs%3D&md5=c4487f0ab9cb88ab8237803d5abc59b6CAS | 11586348PubMed |
