How interactions between wildfire and seasonal soil moisture fluxes drive nitrogen cycling in Northern Sierra Nevada forests
Mary K. Brady A , Erin J. Hanan A * , Matthew B. Dickinson B , Jessica R. Miesel C D , Laura Wade A and Jonathan Greenberg AA Department of Natural Resources and Environmental Science, University of Nevada - Reno, Reno, NV, USA.
B US Forest Service, Northern Research Station, Delaware, OH 43015, USA.
C Department of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI, USA.
D Ecology, Evolution, and Behavior Program, Michigan State University, East Lansing, MI, USA.
International Journal of Wildland Fire 31(8) 786-798 https://doi.org/10.1071/WF21064
Submitted: 14 May 2021 Accepted: 2 June 2022 Published: 8 July 2022
© 2022 The Author(s) (or their employer(s)). Published by CSIRO Publishing on behalf of IAWF.
Abstract
As wildfires become larger and more severe across western North America, it grows increasingly important to understand how they will affect the biogeochemical processes influencing ecosystem recovery. Soil nitrogen (N) cycling is a key process constraining recovery rates. In addition to its direct responses to fire, N cycling can also respond to other post-fire transformations, including increases or decreases in microbial biomass, soil moisture, and pH. To examine the short-term effects of wildfire on belowground processes in the northern Sierra Nevada, we collected soil samples along a gradient from unburned to high fire severity over 10 months following a wildfire. This included immediate pre- and post-fire sampling for many variables at most sites. While season and soil moisture did not substantially alter pH, microbial biomass, net N mineralisation, and nitrification in unburned locations, they interacted with burn severity in complex ways to constrain N cycling after fire. In areas that burned, pH increased (at least initially) after fire, and there were non-monotonic changes in microbial biomass. Net N mineralisation also had variable responses to wetting in burned locations. These changes suggest burn severity and precipitation patterns can interact to alter N cycling rates following fire.
Keywords: fire, nitrogen cycling, post-fire soil properties, pre- and post-fire sampling, Sierra Nevada, soil, soil biogeochemistry, soil timeseries, Walker Fire, wildland fire.
References
Alcañiz M, Outeiro L, Francos M, Úbeda X (2018) Effects of prescribed fires on soil properties: a review. Science of The Total Environment 613–614, 944–957.| Effects of prescribed fires on soil properties: a review.Crossref | GoogleScholarGoogle Scholar | 28946382PubMed |
Aoyama M, Nozawa T (1993) Microbial biomass nitrogen and mineralization-immobilization processes of nitrogen in soils incubated with various organic materials. Soil Science and Plant Nutrition 39, 23–32.
| Microbial biomass nitrogen and mineralization-immobilization processes of nitrogen in soils incubated with various organic materials.Crossref | GoogleScholarGoogle Scholar |
Bailey VL, Peacock AD, Smith JL, Bolton H (2002) Relationships between soil microbial biomass determined by chloroform fumigation–extraction, substrate-induced respiration, and phospholipid fatty acid analysis. Soil Biology and Biochemistry 34, 1385–1389.
| Relationships between soil microbial biomass determined by chloroform fumigation–extraction, substrate-induced respiration, and phospholipid fatty acid analysis.Crossref | GoogleScholarGoogle Scholar |
Bates D, Mächler M, Bolker B, Walker S (2015) Fitting linear mixed-effects models using lme4. Journal of Statistical Software 67, 1–48.
| Fitting linear mixed-effects models using lme4.Crossref | GoogleScholarGoogle Scholar |
Beare MH, Neely CL, Coleman DC, Hargrove WL (1990) A substrate-induced respiration (SIR) method for measurement of fungal and bacterial biomass on plant residues. Soil Biology and Biochemistry 22, 585–594.
| A substrate-induced respiration (SIR) method for measurement of fungal and bacterial biomass on plant residues.Crossref | GoogleScholarGoogle Scholar |
Brady MK, Dickinson MB, Miesel JR, Wonkka CL, Kavanagh KL, Lodge AG, Rogers WE, Starns HD, Tolleson DR, Treadwell ML, Twidwell D, Hanan EJ (2022) Soil Heating in Fire (SheFire): a model and measurement method for estimating soil heating and effects during wildland fires. Ecological Applications e2627
| Soil Heating in Fire (SheFire): a model and measurement method for estimating soil heating and effects during wildland fires.Crossref | GoogleScholarGoogle Scholar | 35397482PubMed |
Campbell JB (1978) Spatial variation of sand content and pH within single contiguous delineations of two soil mapping units. Soil Science Society of America Journal 42, 460–464.
| Spatial variation of sand content and pH within single contiguous delineations of two soil mapping units.Crossref | GoogleScholarGoogle Scholar |
Certini G (2005) Effects of fire on properties of forest soils: a review. Oecologia 143, 1–10.
| Effects of fire on properties of forest soils: a review.Crossref | GoogleScholarGoogle Scholar | 15688212PubMed |
De Boer W, Kowalchuk GA (2001) Nitrification in acid soils: micro-organisms and mechanisms. Soil Biology and Biochemistry 33, 853–866.
| Nitrification in acid soils: micro-organisms and mechanisms.Crossref | GoogleScholarGoogle Scholar |
DeLuca TH, MacKenzie MD, Gundale MJ, Holben WE (2006) Wildfire-produced charcoal directly influences nitrogen cycling in Ponderosa Pine Forests. Soil Science Society of America Journal 70, 448–453.
| Wildfire-produced charcoal directly influences nitrogen cycling in Ponderosa Pine Forests.Crossref | GoogleScholarGoogle Scholar |
Dickinson M, Loncar L, Reiner A, Dailey S, Bednarczyk J, Drake C, Gordon J, Heckel M, Kleckler B, Miesel J, Wade L (2019) 2019 Walker Fire, Plumas National Forest, Fire Behavior Assessment Team (FBAT) Report. US Forest Service 34.
Fierer N (2003) ‘Stress Ecology and the Dynamics of Microbial Communities and Processes in Soil.’ (University of California: Santa Barbara, CA, USA)
Fox J, Weisberg S (2018) ‘An R Companion to Applied Regression’, 3rd edn. (Sage Publications: Thousand Oaks, CA, USA)
Gallardo A, Schlesinger WH (1995) Factors determining soil microbial biomass and nutrient immobilization in desert soils. Biogeochemistry 28, 55–68.
| Factors determining soil microbial biomass and nutrient immobilization in desert soils.Crossref | GoogleScholarGoogle Scholar |
Gergel DR, Nijssen B, Abatzoglou JT, Lettenmaier DP, Stumbaugh MR (2017) Effects of climate change on snowpack and fire potential in the western USA. Climatic Change 141, 287–299.
| Effects of climate change on snowpack and fire potential in the western USA.Crossref | GoogleScholarGoogle Scholar |
González-Pérez JA, González-Vila FJ, Almendros G, Knicker H (2004) The effect of fire on soil organic matter – a review. Environment International 30, 855–870.
| The effect of fire on soil organic matter – a review.Crossref | GoogleScholarGoogle Scholar | 15120204PubMed |
Goodridge BM, Hanan EJ, Aguilera R, Wetherley EB, Chen Y-J, D’Antonio CM, Melack JM (2018) Retention of nitrogen following wildfire in a chaparral ecosystem. Ecosystems 21, 1608–1622.
| Retention of nitrogen following wildfire in a chaparral ecosystem.Crossref | GoogleScholarGoogle Scholar |
Grogan P, Burns TD, Chapin III FS (2000) Fire effects on ecosystem nitrogen cycling in a Californian bishop pine forest. Oecologia 122, 537–544.
| Fire effects on ecosystem nitrogen cycling in a Californian bishop pine forest.Crossref | GoogleScholarGoogle Scholar | 28308347PubMed |
Gustine RN, Hanan EJ, Robichaud PR, Elliot WJ (2022) From burned slopes to streams: how wildfire affects nitrogen cycling and retention in forests and fire-prone watersheds. Biogeochemistry 157, 51–68.
| From burned slopes to streams: how wildfire affects nitrogen cycling and retention in forests and fire-prone watersheds.Crossref | GoogleScholarGoogle Scholar |
Hanan EJ, D’Antonio CM, Roberts DA, Schimel JP (2016a) Factors regulating nitrogen retention during the early stages of recovery from fire in coastal Chaparral ecosystems. Ecosystems 19, 910–926.
| Factors regulating nitrogen retention during the early stages of recovery from fire in coastal Chaparral ecosystems.Crossref | GoogleScholarGoogle Scholar |
Hanan EJ, Schimel JP, Dowdy K, D’Antonio CM (2016b) Effects of substrate supply, pH, and char on net nitrogen mineralization and nitrification along a wildfire-structured age gradient in chaparral. Soil Biology and Biochemistry 95, 87–99.
| Effects of substrate supply, pH, and char on net nitrogen mineralization and nitrification along a wildfire-structured age gradient in chaparral.Crossref | GoogleScholarGoogle Scholar |
Hanan EJ, Ren J, Tague CL, Kolden CA, Abatzoglou JT, Bart RR, Kennedy MC, Liu M, Adam JC (2021) How climate change and fire exclusion drive wildfire regimes at actionable scales. Environmental Research Letters 16, 024051
| How climate change and fire exclusion drive wildfire regimes at actionable scales.Crossref | GoogleScholarGoogle Scholar |
Hatchett BJ, Daudert B, Garner CB, Oakley NS, Putnam AE, White AB (2017) Winter snow level rise in the northern Sierra Nevada from 2008 to 2017. Water 9, 899
| Winter snow level rise in the northern Sierra Nevada from 2008 to 2017.Crossref | GoogleScholarGoogle Scholar |
Homann PS, Bormann BT, Darbyshire RL, Morrissette BA (2011) Forest soil carbon and nitrogen losses associated with wildfire and prescribed fire. Soil Science Society of America Journal 75, 1926–1934.
| Forest soil carbon and nitrogen losses associated with wildfire and prescribed fire.Crossref | GoogleScholarGoogle Scholar |
Hood-Nowotny R, Umana NH-N, Inselbacher E, Oswald-Lachouani P, Wanek W (2010) Alternative methods for measuring inorganic, organic, and total dissolved nitrogen in soil. Soil Science Society of America Journal 74, 1018–1027.
| Alternative methods for measuring inorganic, organic, and total dissolved nitrogen in soil.Crossref | GoogleScholarGoogle Scholar |
Hothorn T, Bretz F, Westfall P (2008) Simultaneous inference in general parametric models. Biometrical Journal 50, 346–363.
| Simultaneous inference in general parametric models.Crossref | GoogleScholarGoogle Scholar | 18481363PubMed |
Howat IM, Tulaczyk S (2005) Climate sensitivity of spring snowpack in the Sierra Nevada. Journal of Geophysical Research: Earth Surface 110, F04021
| Climate sensitivity of spring snowpack in the Sierra Nevada.Crossref | GoogleScholarGoogle Scholar |
Hudak AT, Morgan P, Bobbitt MJ, Smith AMS, Lewis SA, Lentile LB, Robichaud PR, Clark JT, McKinley RA (2007) The relationship of multispectral satellite imagery to immediate fire effects. Fire Ecology 3, 64–90.
| The relationship of multispectral satellite imagery to immediate fire effects.Crossref | GoogleScholarGoogle Scholar |
Johnson DW, Susfalk RB, Dahlgren RA, Klopatek JM (1998) Fire is more important than water for nitrogen fluxes in semi-arid forests. Environmental Science & Policy 1, 79–86.
| Fire is more important than water for nitrogen fluxes in semi-arid forests.Crossref | GoogleScholarGoogle Scholar |
Johnson DW, Miller WW, Susfalk RB, Murphy JD, Dahlgren RA, Glass DW (2009) Biogeochemical cycling in forest soils of the eastern Sierra Nevada Mountains, USA. Forest Ecology and Management 258, 2249–2260.
| Biogeochemical cycling in forest soils of the eastern Sierra Nevada Mountains, USA.Crossref | GoogleScholarGoogle Scholar |
Keeley JE (2009) Fire intensity, fire severity and burn severity: a brief review and suggested usage. International Journal of Wildland Fire 18, 116–126.
| Fire intensity, fire severity and burn severity: a brief review and suggested usage.Crossref | GoogleScholarGoogle Scholar |
Knelman JE, Graham EB, Trahan NA, Schmidt SK, Nemergut DR (2015) Fire severity shapes plant colonization effects on bacterial community structure, microbial biomass, and soil enzyme activity in secondary succession of a burned forest. Soil Biology and Biochemistry 90, 161–168.
| Fire severity shapes plant colonization effects on bacterial community structure, microbial biomass, and soil enzyme activity in secondary succession of a burned forest.Crossref | GoogleScholarGoogle Scholar |
Knicker H (2007) How does fire affect the nature and stability of soil organic nitrogen and carbon? A review. Biogeochemistry 85, 91–118.
| How does fire affect the nature and stability of soil organic nitrogen and carbon? A review.Crossref | GoogleScholarGoogle Scholar |
Kranz C, Whitman T (2019) Short communication: surface charring from prescribed burning has minimal effects on soil bacterial community composition two weeks post-fire in jack pine barrens. Applied Soil Ecology 144, 134–138.
| Short communication: surface charring from prescribed burning has minimal effects on soil bacterial community composition two weeks post-fire in jack pine barrens.Crossref | GoogleScholarGoogle Scholar |
MacDonald NW, Zak DR, Pregitzer KS (1995) Temperature effects on kinetics of microbial respiration and net nitrogen and sulfur mineralization. Soil Science Society of America Journal 59, 233–240.
| Temperature effects on kinetics of microbial respiration and net nitrogen and sulfur mineralization.Crossref | GoogleScholarGoogle Scholar |
Morgan P, Keane RE, Dillon GK, Jain TB, Hudak AT, Karau EC, Sikkink PG, Holden ZA, Strand EK (2014) Challenges of assessing fire and burn severity using field measures, remote sensing and modelling. International Journal of Wildland Fire 23, 1045–1060.
| Challenges of assessing fire and burn severity using field measures, remote sensing and modelling.Crossref | GoogleScholarGoogle Scholar |
Murphy JD, Johnson DW, Miller WW, Walker RF, Blank RR (2006) Prescribed fire effects on forest floor and soil nutrients in a Sierra Nevada Forest. Soil Science 171, 181–199.
| Prescribed fire effects on forest floor and soil nutrients in a Sierra Nevada Forest.Crossref | GoogleScholarGoogle Scholar |
Neary DG, Klopatek CC, DeBano LF, Ffolliott PF (1999) Fire effects on belowground sustainability: a review and synthesis. Forest Ecology and Management 122, 51–71.
| Fire effects on belowground sustainability: a review and synthesis.Crossref | GoogleScholarGoogle Scholar |
Neary DG, Ryan KC, DeBano LF (2005) Wildland fire in ecosystems: effects of fire on soils and water. Gen Tech Rep RMRS-GTR-42-Vol4. Vol. 42, p. 262. (US Department of Agriculture, Forest Service, Rocky Mountain Research Station: Ogden, UT)
| Crossref |
NRCS, UC Davis (2020) ‘Web Soil Survey.’ (California Soil Resources Lab)
Parson A, Robichaud PR, Lewis SA, Napper C, Clark JT (2010) Field guide for mapping post-fire soil burn severity. General Technical Report of the Rocky Mountain Research Station GTR-243. (US Department of Agriculture, Forest Service, Rocky Mountain Research Station: Ft. Collins, CO, USA)
| Crossref |
Pellegrini AFA, Caprio AC, Georgiou K, Finnegan C, Hobbie SE, Hatten JA, Jackson RB (2021) Low-intensity frequent fires in coniferous forests transform soil organic matter in ways that may offset ecosystem carbon losses. Global Change Biology 27, 3810–3823.
| Low-intensity frequent fires in coniferous forests transform soil organic matter in ways that may offset ecosystem carbon losses.Crossref | GoogleScholarGoogle Scholar | 33884700PubMed |
Pingree MRA, Homann PS, Morrissette B, Darbyshire R (2012) Long and short-term effects of fire on soil charcoal of a conifer forest in southwest Oregon. Forests 3, 353–369.
| Long and short-term effects of fire on soil charcoal of a conifer forest in southwest Oregon.Crossref | GoogleScholarGoogle Scholar |
Pinheiro J, Bates D, DebRoy S, Sarkar D, R Core Team (2020) nlme: linear and nonlinear mixed effects models. Available at https://CRAN.R-project.org/package=nlme
Prosser JI (1990) Autotrophic nitrification in bacteria. In ‘Advances in Microbial Physiology’. (Eds AH Rose, DW Tempest) pp. 125–181. (Academic Press: New York, NY, USA)
| Crossref |
Prosser JI, Nicol GW (2012) Archaeal and bacterial ammonia-oxidisers in soil: the quest for niche specialisation and differentiation. Trends in Microbiology 20, 523–531.
| Archaeal and bacterial ammonia-oxidisers in soil: the quest for niche specialisation and differentiation.Crossref | GoogleScholarGoogle Scholar | 22959489PubMed |
R Core Team (2020) ‘R: A Language and Environment for Statistical Computing.’ (R Foundation for Statistical Computing: Vienna, Austria) Available at https://www.R-project.org/
Ren G, He M, Li G, Anandkumar A, Dai Z, Zou CB, Hu Z, Ran Q, Du D (2020) Effects of Solidago canadensis invasion and climate warming on soil net N mineralization. Polish Journal of Environmental Studies 29, 3285–3294.
| Effects of Solidago canadensis invasion and climate warming on soil net N mineralization.Crossref | GoogleScholarGoogle Scholar |
Ren J, Hanan EJ, Abatzoglou JT, Kolden CA, Tague C(N)L, Kennedy MC, Liu M, Adam JC (2022) Projecting future fire regimes in a semiarid watershed of the inland northwestern United States: interactions among climate change, vegetation productivity, and fuel dynamics. Earth’s Future 10, e2021EF002518
| Projecting future fire regimes in a semiarid watershed of the inland northwestern United States: interactions among climate change, vegetation productivity, and fuel dynamics.Crossref | GoogleScholarGoogle Scholar |
Robichaud P, Brown RE (2019) High temperature soil probe. Available at https://patents.google.com/patent/US20190072434A1/en
Santos F, Wymore AS, Jackson BK, Sullivan SMP, McDowell WH, Berhe AA (2019) Fire severity, time since fire, and site-level characteristics influence streamwater chemistry at baseflow conditions in catchments of the Sierra Nevada, California, USA. Fire Ecology 15, 3
| Fire severity, time since fire, and site-level characteristics influence streamwater chemistry at baseflow conditions in catchments of the Sierra Nevada, California, USA.Crossref | GoogleScholarGoogle Scholar |
Scheipl F, Greven S, Kuechenfoff H (2008) Size and power of tests for a zero random effect variance or polynomial regression in additive and linear mixed models. Computational Statistics & Data Analysis 52, 3283–3299.
| Size and power of tests for a zero random effect variance or polynomial regression in additive and linear mixed models.Crossref | GoogleScholarGoogle Scholar |
Schimel JP, Bennett J (2004) Nitrogen mineralization: challenges of a changing paradigm. Ecology 85, 591–602.
| Nitrogen mineralization: challenges of a changing paradigm.Crossref | GoogleScholarGoogle Scholar |
Sierra J (1997) Temperature and soil moisture dependence of N mineralization in intact soil cores. Soil Biology and Biochemistry 29, 1557–1563.
| Temperature and soil moisture dependence of N mineralization in intact soil cores.Crossref | GoogleScholarGoogle Scholar |
Stark JM, Firestone MK (1995) Mechanisms for soil moisture effects on activity of nitrifying bacteria. Applied and Environmental Microbiology 61, 218–221.
| Mechanisms for soil moisture effects on activity of nitrifying bacteria.Crossref | GoogleScholarGoogle Scholar | 16534906PubMed |
Ste-Marie C, Paré D (1999) Soil, pH and N availability effects on net nitrification in the forest floors of a range of boreal forest stands. Soil Biology and Biochemistry 31, 1579–1589.
| Soil, pH and N availability effects on net nitrification in the forest floors of a range of boreal forest stands.Crossref | GoogleScholarGoogle Scholar |
Stephens SL, Meixner T, Poth M, McGurk B, Payne D (2004) Prescribed fire, soils, and stream water chemistry in a watershed in the Lake Tahoe Basin, California. International Journal of Wildland Fire 13, 27–35.
| Prescribed fire, soils, and stream water chemistry in a watershed in the Lake Tahoe Basin, California.Crossref | GoogleScholarGoogle Scholar |
Turner MG, Hargrove WW, Gardner RH, Romme WH (1994) Effects of fire on landscape heterogeneity in Yellowstone National Park, Wyoming. Journal of Vegetation Science 5, 731–742.
| Effects of fire on landscape heterogeneity in Yellowstone National Park, Wyoming.Crossref | GoogleScholarGoogle Scholar |
Turner MG, Smithwick EAH, Metzger KL, Tinker DB, Romme WH (2007) Inorganic nitrogen availability after severe stand-replacing fire in the Greater Yellowstone ecosystem. Proceedings of the National Academy of Sciences 104, 4782–4789.
| Inorganic nitrogen availability after severe stand-replacing fire in the Greater Yellowstone ecosystem.Crossref | GoogleScholarGoogle Scholar |
van Mantgem PJ, Nesmith JCB, Keifer M, Knapp EE, Flint A, Flint L (2013) Climatic stress increases forest fire severity across the western United States. Ecology Letters 16, 1151–1156.
| Climatic stress increases forest fire severity across the western United States.Crossref | GoogleScholarGoogle Scholar | 23869626PubMed |
van Wagtendonk JW, Fites-Kaufman JA, Safford HD, North MP, Collins B (2018) Sierra Nevada bioregion. In ‘Fire in California’s Ecosystems’. (Eds JW van Wagtendonk, NG Sugihara, SL Stephens, AE Thode, KE Shaffer, JA Fites-Kaufman) pp. 249–279. (University of California Press) Available at https://www.fs.usda.gov/treesearch/pubs/60811
Verma S, Jayakumar S (2012) Impact of forest fire on physical, chemical and biological properties of soil: A review. In ‘Proceedings of the International Academy of Ecology and Environmental Sciences’ Vol 2(3), (Eds WJ Zhang et al.) pp. 168–176. (International Academy of Ecology and Environmental Sciences) Available at http://www.iaees.org/publications/journals/piaees/articles/2012-2(3)/impact-of-forest-fire.pdf
Vitousek PM, Melillo JM (1979) Nitrate losses from disturbed forests: patterns and mechanisms. Forest Science 25, 605–619.
| Nitrate losses from disturbed forests: patterns and mechanisms.Crossref | GoogleScholarGoogle Scholar |
Vitousek PM, Gosz JR, Grier CC, Melillo JM, Reiners WA, Todd RL (1979) Nitrate losses from disturbed ecosystems. Science 204, 469–474.
| Nitrate losses from disturbed ecosystems.Crossref | GoogleScholarGoogle Scholar | 17819936PubMed |
Watson SW, Bock E, Harms H, Koops HP, Hooper AB (1989) Nitrifying bacteria. In ‘Bergey's Manual of Systematic Bacteriology’. pp. 1808–1834. (The Williams and Wilkins Co.: Baltimore, MD, USA) Available at https://ci.nii.ac.jp/naid/10030102901/
Weber CF, Lockhart JS, Charaska E, Aho K, Lohse KA (2014) Bacterial composition of soils in ponderosa pine and mixed conifer forests exposed to different wildfire burn severity. Soil Biology and Biochemistry 69, 242–250.
| Bacterial composition of soils in ponderosa pine and mixed conifer forests exposed to different wildfire burn severity.Crossref | GoogleScholarGoogle Scholar |
West AW, Sparling GP (1986) Modifications to the substrate-induced respiration method to permit measurement of microbial biomass in soils of differing water contents. Journal of Microbiological Methods 5, 177–189.
| Modifications to the substrate-induced respiration method to permit measurement of microbial biomass in soils of differing water contents.Crossref | GoogleScholarGoogle Scholar |
Westerling AL, Hidalgo HG, Cayan DR, Swetnam TW (2006) Warming and earlier spring increase western U.S. forest wildfire activity. Science 313, 940–943.
| Warming and earlier spring increase western U.S. forest wildfire activity.Crossref | GoogleScholarGoogle Scholar | 16825536PubMed |
Whitman T, Whitman E, Woolet J, Flannigan MD, Thompson DK, Parisien M-A (2019) Soil bacterial and fungal response to wildfires in the Canadian boreal forest across a burn severity gradient. Soil Biology and Biochemistry 138, 107571
| Soil bacterial and fungal response to wildfires in the Canadian boreal forest across a burn severity gradient.Crossref | GoogleScholarGoogle Scholar |
Wickham H (2016) ‘ggplot2: Elegant Graphics for Data Analysis.’ (Springer-Verlag: New York, NY, USA)