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Functional Plant Biology

Functional Plant Biology

Functional Plant Biology publishes new and significant information on the functional biology of plants at all scales from the molecular through whole plant to community. Read more about the journalMore

Editor-in-Chief: Sergey Shabala

Publishing Model: Hybrid. Open Access options available.

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Latest

These articles are the latest published in the journal. Functional Plant Biology has moved to a continuous publication model. More information is available on our Continuous Publication page.

Published online 05 September 2024

FP24107Augmenting the basis of lodging tolerance in wheat (Triticum aestivum) under natural and simulated conditions

Rinki Khobra 0000-0002-9056-5018, Sonia Sheoran, Sindhu Sareen, Braj Kishor Meena, Arvind Kumar and Gyanendra Singh
 

Lodging occurs when crop stems bend permanently from their usual upright position, reducing yield. Lodging has been witnessed in various places worldwide, and its unpredictable nature makes it a substantial constraint for yield improvement.To better understand this process and determine the trait best correlated with lodging in wheat (Triticum aestivum), a study was conducted under both artificially-induced and natural lodging conditions. Genotypes were ranked, and we tried to standardise methodology for measuring lodging tolerance in an artificial environment.

FP24107 Abstract  | PDF (1 MB) - $35.00   | FP24107Supplementary Material (1.5 MB)
Published online 02 September 2024

FP24114Glycoside hydrolases reveals their differential role in response to drought and salt stress in potato (Solanum tuberosum)

  Aiana, Hanny Chauhan and Kashmir Singh 0000-0002-9646-9043
 

Glycoside hydrolases (GHs) are involved in plant defence, cell wall metabolism and stress response. A total of 366 GH superfamily genes were identified in potato (Solanum tuberosum). Differential expression analysis indicated the involvement of GHs in various tissues, abiotic stress and biotic stresses, with specific genes showing significant changes in expression levels under drought and salt stress. Real time qPCR analysis revealed that StGH16.24 expression increased significantly after 3 days of drought stress, validating the presence of ABRE, MYB and MYC cis-regulatory elements.

This article belongs to the Collection Functional Genomics for Developing Climate Resilient Crops.

FP24114 Abstract  | PDF (7.7 MB) - $35.00   | FP24114Supplementary Material (3.8 MB)
Published online 02 September 2024

FP24092Genome editing for improvement of biotic and abiotic stress tolerance in cereals

Safeena Inam, Amna Muhammad, Samra Irum, Nazia Rehman, Aamir Riaz 0000-0003-1693-277X, Muhammad Uzair 0000-0001-8329-9762 and Muhammad Ramzan Khan
 

The world population is increasing day by day. Cereals are a good source of energy for this increasing population. Climate changes exert pressure on agriculture and hinder overall production. Genome editing techniques such as CRISPR/Cas have been extensively used to improve crops. In this review, we summarise the different genome editing techniques, their advantages, and disadvantages.

This article belongs to the Collection Functional Genomics for Developing Climate Resilient Crops.

FP24092 Abstract  | PDF (1.8 MB) - $35.00 
Published online 02 September 2024

FP24008Coordination between water relations strategy and carbon investment in leaf and stem in six fruit tree species

Ismael Piña 0009-0009-0696-9756, Marco Garrido-Salinas 0000-0002-8424-0540, Oscar Seguel, Ismael Opazo, Carlos Faúndez-Urbina, Nicolás Verdugo-Vásquez and Emilio Villalobos-Soublett
 

Water relations strategy of plants is a complex but important trait in selecting cultivars and design management for adaptation to climate change. Among the possible estimating traits, those associated with the ‘fast-slow’ plant economics spectrum are interesting, regarding this, we observed an association between the water deficit tolerance of six fruit tree species and their leaf and wood density. These traits are easy to measure, time-cost efficient, and appear central to coordinating traits and behaviours along the water relations strategies.

FP24008 Abstract  | PDF (1.2 MB) - $35.00   | FP24008Supplementary Material (1.2 MB)
Published online 02 September 2024

FP24023Investigating the combined effects of β-sitosterol and biochar on nutritional value and drought tolerance in Phaseolus vulgaris under drought stress

Marwa A. Fakhr 0000-0002-9879-7729, Abdelghafar M. Abu-Elsaoud, Khadiga Alharbi, Muhammad Zia-ur-Rehman 0000-0002-9042-9171, Muhammad Usman 0000-0001-8804-3790 and Mona H. Soliman 0000-0002-9102-4790
 

Co-applying β-sitosterol and biochar improved drought resilience in Phaseolus vulgaris. Nutrient uptake and biochemical metrics increased in P. vulgaris with the combined effect of β-sitosterol and biochar. This approach enhances growth parameters, suggesting resilience to climate change.

FP24023 Abstract  | PDF (442 KB) - $35.00   | FP24023Supplementary Material (2.1 MB)
Published online 29 August 2024

FP23244Biochemical and physiological time-of-day variations in early-development phase of Agave mapisaga and Agave salmiana

Jesus A. Jiménez-Torres 0000-0001-6231-6172, Cecilia B. Peña-Valdivia 0000-0003-4245-0547, Baruch Arroyo, Daniel Padilla-Chacón 0000-0001-9887-1063 and Rodolfo García
 

The morphological and physiological adaptations of Agave species, including the Classulacean acid metabolism (CAM), allow plants to develop in arid and semi-arid environments. Four diel phases have been described in CAM plants that regulate carbon metabolism, growth and yield. The hypothesis is that in early-development plants from seeds, growing under greenhouse conditions, of each genotype’s physiological responses, including growth and metabolites concentrations, vary among CAM phases because of the species of Agave and the seed provenance.

FP23244 Abstract  | PDF (657 KB) - $35.00   | FP23244Supplementary Material (897 KB)
Published online 27 August 2024

FP24135Expression of heterosis in photosynthetic traits in F1 generation of sorghum (Sorghum bicolor) hybrids and relationship with yield traits

Renjie Zhao, Yueqiao Li, Chen Xu, Zhian Zhang 0009-0003-3745-0734, Ziyang Zhou, Yihan Zhou and Zexin Qi
 

There is limited information on the hybridisation of enzymes linked to these characteristics. Understanding hybrid dominance of photosynthetic traits and their associated enzymes in sorghum is crucial for identifying sorghum hybrids with highly dominant combinations and selecting suitable parents. This study utilised 36 sorghum hybrid F1 generations and their respective parents to assess hybrid dominance in leaf photosynthetic parameters, key enzyme activities during photosynthesis, yield formation, and other relevant factors, while also examining their correlation with yield in field conditions.

This article belongs to the Collection Machine Learning for Plant Stress Phenotyping.

FP24135 Abstract  |  FP24135 Full Text  | FP24135PDF (2 MB)   Open Access Article

Published online 20 August 2024

FP23238Overexpression of forage millet (Setaria italica) SiER genes enhances drought resistance of Arabidopsis thaliana

Hanjing Dai, Xiaoyi Huang, Yingrun Wang, Shoujing Zhu, Jieqin Li, Zhaoshi Xu and Jiacheng Zheng 0000-0002-9475-7877
 

ERECTA (ER) protein plays a crucial role in various aspects of plant growth, development, and responses to abiotic stresses. To explore the functional characteristics of the SiER family genes in millet (Setaria italica), overexpression of SiER genes (SiER1_X4 and SiER4_X1) showed the significant regulation on enhancing the plant biomass and drought resistance of Arabidopsis thaliana. Therefore, SiER genes promise the crucial candidate genes for improving biomass production and drought resistance in forage plants.

FP23238 Abstract  |  FP23238 Full Text  | FP23238PDF (5.7 MB)  | FP23238Supplementary Material (1.3 MB)   Open Access Article

Published online 20 August 2024

FP24104Unveiling the hidden reserves: allocation strategies associated with underground organs of Cerrado legumes in fire-prone savannas

Bruno Bonadio Cozin, Tassia Caroline Ferreira, L. Felipe Daibes, Isabella Fiorini de Carvalho, Beatriz Silvério dos Santos, Roberta Possas de Souza, Liliane Santos de Camargos and Aline Redondo Martins 0000-0002-2931-4981
 

In this paper, we explore the intricate world of savanna plant dynamics. Studying reserve allocation in these plants is crucial for understanding their response to disturbances. Our research quantifies reserves in savanna legumes, examining compound distribution between leaves and underground organs. Discoveries reveal the role of underground organs as carbohydrate depots and nitrogen reserves, shedding light on the diverse accumulation patterns across different organ types. These insights offer invaluable knowledge for understanding species survival in fire-prone savannas.

FP24104 Abstract  | PDF (4 MB) - $35.00   | FP24104Supplementary Material (507 KB)
Published online 20 August 2024

FP24084Assessment of physiological and biochemical responses of chilli (Capsicum annuum) varieties in floating bed cultivation for adaptation to waterlogged areas of Bangladesh

Md. Al-Imran, Dipalok Karmaker, Shawon Mitra, Ishita Haider, Md. Alimur Rahman and Subroto K. Das 0000-0003-2763-0232
 

Floating agriculture is a promising way of crop cultivation under submergence. Production of chilli (Capsicum annuum), an important spice crop, is greatly affected by waterlogging. In submerged conditions, floating agriculture serves an alternative agronomic means of chilli cultivation.

FP24084 Abstract  | PDF (2 MB) - $35.00 
Published online 20 August 2024

FP24064Enhancing stress resilience in soybeans (Glycine max): assessing the efficacy of priming and cross-priming for mitigating water deficit and waterlogging effects

Adriano U. Bester, Eduardo P. Shimoia 0000-0002-2889-4259, Cristiane J. Da-Silva 0000-0003-3239-5927, Douglas A. Posso, Ivan R. Carvalho, Fernanda M. Corrêa, Ana C. B. de Oliveira and Luciano do Amarante
 

Priming is a method where the exposition of a plant to a mild stress before a severe one enables quicker stress response, and holds promise in mitigating water stress. This study assessed the efficacy of priming in combating waterlogging and dehydration in soybean (Glycine max) plants. Results revealed that priming significantly boosted antioxidant enzyme activity and organic compound levels while reducing oxidative damage. Such findings suggest that priming could help soybean cultivation, enhancing resilience against climate-induced adversities and ensuring global food security.

FP24064 Abstract  | PDF (1.9 MB) - $35.00   | FP24064Supplementary Material (748 KB)
Published online 13 August 2024

FP24068Insight into a region of chickpea (Cicer arietinum L.) Chromosome 2 revealed potential candidate genes linked to Foc4 Fusarium wilt resistance

Karma L. Bhutia 0000-0002-3326-0349, Anima Kisku, Bharati Lap, Sangita Sahni, Madhuri Arya, Nangsol D. Bhutia, Mahtab Ahmad, Rashmi Chaturvedi, Rajalingam Amutha Sudhan and Vinay Kumar Sharma
 

A particular region of the second chromosome of chickpea (Cicer arietinum) is known to be associated with resistance to the fungal disease Fusarium wilt; but the actual genes causing resistance are unknown. We found seven genes that were substantially correlated with fusarium resistance. These can be used in breeding programs to produce varieties of chickpea more robust to disease.

This article belongs to the Collection Functional Genomics for Developing Climate Resilient Crops.

FP24068 Abstract  | PDF (1.9 MB) - $35.00   | FP24068Supplementary Material (735 KB)
Published online 01 August 2024

FP23089Canola (Brassica napus) enhances sodium chloride and sodium ion tolerance by maintaining ion homeostasis, higher antioxidant enzyme activity and photosynthetic capacity fluorescence parameters

Lupeng Sun, Xiaoqiang Cao, Juncan Du, Yan Wang and Fenghua Zhang 0000-0002-1666-9548
 

Both sodium chloride and sodium salt treatments inhibited the growth of canola seedlings. Sodium chloride imposed the most damage, and chloride salts the least. Under treatment with sodium chloride and sodium salt, the canola variety Huayouza 62 grew best, by maintaining lower sodium content in the root system, higher magnesium content, and a greater ratio of magnesium to sodium to improve photosynthetic capacity. Chloride salts had a positive role in inducing oxidative stress and responsive antioxidant defence in canola seedlings.

FP23089 Abstract  | PDF (1.3 MB) - $35.00   | FP23089Supplementary Material (845 KB)
Published online 29 July 2024

FP24136Evolutionary analysis of genes from WOX family and their expression profile in grape (Vitis vinifera) under different stresses

Meishuang Gong, Xu Lu, Congcong Zhang, Lei Ma, Haokai Yan, Guojie Nai, Ying Lai, Yuanyuan Li, Zhihui Pu, Baihong Chen 0000-0002-6963-1279, Shaoying Ma and Sheng Li 0000-0003-0432-9578
 

WOX is a family of genes that help regulate how plants develop and also respond to stress. In this study, 12 WOX genes were identified in grapes and analysed by bioinformatic methods. Coanalysis of different expression patterns in grapes showed that two of these genes respond to specific viruses and effectively block virus replication and infestation. Another gene was the most sensitive to salt stress. This study provides preliminary evidence that these three genes are key to resistance to salt and to viruses in grape, providing vital candidate genes for grapevine breeding

FP24136 Abstract  | PDF (2.4 MB) - $35.00   | FP24136Supplementary Material (1.3 MB)
Published online 22 July 2024

FP23218Evaluation of reference genes and expression patterns of CONSTANS-LIKE genes in Tetrastigma hemsleyanum under different photoperiods

Gang Zhao, Wenling Liu, Guowei Lin and Jing Wen 0000-0003-1265-7539
 

The CONSTANS-LIKE (COL) gene is key to plant photoperiod signalling. Tetrastigma hemsleyanum is a medicinal plant that grows only in China. Its root tuber extracts have good effect on the clinical treatment of tumours. The formation and development of its tuberous roots are related to photoperiod. In this study, the expression profiles of COL genes in T. hemsleyanum leaf under different photoperiod conditions was analysed and used to analyse whether COL genes have a role in T. hemsleyanum perception of photoperiod signalling.

FP23218 Abstract  | PDF (791 KB) - $35.00 

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Collections are a curation of articles relevant to a topical research area

Functional Genomics for Developing Climate Resilient Crops

This Collection of Functional Plant Biology includes articles summarising the technological and conceptual advancement in genetics and functional genomics with the potential for achieving the United Nations' second sustainable development goal of zero hunger under challenging climatic conditions. These articles illustrate the development of cutting-edge technologies helping researchers to develop germplasm with better resistance/tolerance for emerging food security threats.

Collection Editors
Sajid Fiaz (Department of Plant Breeding and Genetics, The University of Haripur, Pakistan)
Muhammad Azhar Nadeem (Sivas University of Science and Technology, Turkey)
Inzamam Ul Haq (Gansu Agricultural University, China)

Last Updated: 13 Aug 2024

Flooding Stress and Responses to Hypoxia in Plants

This Collection of Functional Plant Biology focuses on ‘Flooding stress and responses to hypoxia in plants’ and includes papers demonstrating various plant responses to low-O2 conditions, flooding stress and a combination of stresses commonly found in flooded areas. This compilation significantly advances our understanding of flooding stress and responses to low-O2 levels in plants.

Collection Editors
Romy Schmidt-Schippers (University of Bielefeld, Germany)
Ole Pedersen (University of Copenhagen, Denmark)
Angelika Mustroph (University of Bayreuth, Germany)
Daan Weits (Utrecht University, Netherlands)
Juan Jiménez (University of Copenhagen, Denmark)

Last Updated: 15 Mar 2024

Understanding Mechanistic Basis of Plant Adaptation to Salinity and Drought

Drought and salinity are two major constraints in agriculture, restricting plant growth and yield in many parts of the world, especially in arid and semi-arid regions, and in the majority of plants, growth ceases under extreme exposure to drought and salt stress. This collection of Functional Plant Biology papers focuses on the advances and progress in studying the underlying mechanisms of salinity and drought tolerance in plants, particularly those that are considered agriculturally important.

Collection Editors
Muhammad Waseem (Hainan University, Sanya, China)
Mehtab Muhammad Aslam (The Chinese University of Hong Kong, Shatin, China)
Sunil Kumar Sahu (Beijing Genomics Institute, Shenzhen, China)

Last Updated: 15 Feb 2024

Editor’s Choice – ‘Abiotic stress signalling and adaptation’

Agricultural crop production has to be increased by 70% by 2050 to ensure food security and meet the challenge of feeding a population of 9.3 billion. The only way to meet this challenge is by identifying key genes and mechanisms mediating plant sensing, signalling and adaptation to adverse environmental conditions, and then using modern genetic tools to modify them, to enable better plant performance. The papers selected for this Functional Plant Biology Collection contribute to this task and, therefore, may be of substantial interest to readers.

Collection Editor
Professor Sergey Shabala, Editor-in-Chief

Last Updated: 02 Oct 2017

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