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RESEARCH ARTICLE
Contents Vol 35(10)

Building a topological and geometrical model of poplar tree using portable on-ground scanning LIDAR

Maurizio Teobaldelli A C , Alcoriza David Puig B , Terenzio Zenone A , Marco Matteucci A , Günther Seufert A and Vitor Sequeira B
+ Author Affiliations
- Author Affiliations

A EC, Joint Research Centre, Institute for Environment and Sustainability, Climate Change Unit, 21027, Ispra, Italy.

B EC, Joint Research Centre, Institute for the Protection and Security of the Citizen, Nuclear Safeguards Unit, 21027, Ispra, Italy.

C Corresponding author. Email: maurizio.teobaldelli@jrc.it

This paper originates from a presentation at the 5th International Workshop on Functional–Structural Plant Models, Napier, New Zealand, November 2007.

Functional Plant Biology 35(10) 1080-1090 https://doi.org/10.1071/FP08053
Submitted: 7 March 2008  Accepted: 29 July 2008   Published: 11 November 2008

Abstract

The objectives of this research were to investigate the suitability of advanced technologies like 3D-Laser scanning to acquire fair and sound information on structural and architectural characteristics of poplar stand, and to map topology of above-ground tree structures. The study area was an intensive poplar plantation located ~10 km north-west of the city of Pavia within the ‘Parco Regionale del Ticino’, Italy. A forest inventory of the poplar stand was conducted in 2005 and three 14-year-old poplar trees were selected and felled. The main architectural characteristics of poplar trees (destructive measurement) were compared with indirect measurement carried out using a portable on-ground scanning LIDAR IMAGER 5003 combined with the JRC-Reconstructor and AMAPmod softwares. The method permitted us to make an accurate estimate of the vertical and horizontal structure of the stand, to evaluate the stem and branches morphology of selected trees at different height in the canopy, and to create and validate multiscale representations of poplar tree architecture.

Additional keywords: IMAGER 5003, multiscale tree graph, AMAPmod, JRC-Reconstructor, Populus spp.


Acknowledgements

This research was supported by the CarboEurope IP project, funded by the European Commission, Directorate-General Research, Sixth Framework Program (Contract N. GOCE-CT-2003–505572). The structural tree modelling (indirect stand and tree architecture analysis and topology coding) was made by M. Teobaldelli; range scans were made by D. Puig and M. Teobaldelli; the direct tree architectural analysis and biomass survey were made by M. Teobaldelli, Z. Terenzio and M. Matteucci; technical and financial support were provided by G. Seufert and V. Sequeira. We thank Marlene Dürr, Zoltan Somogyi and the other colleagues of the Climate Change Units for helping us during the direct measurement. We also thank Yves Caraglio (CIRAD-UMR AMAP, Montpellier-France) and Frédéric Danjon (INRA, France) for help and comments during the preparation of the manuscript. Moreover, we thank the two anonymous reviewers and the two editors whose contributions were helpful in improving this paper.


References


Aschoff T , Thies M , Spiecker H (2004) ‘Describing forest stands using terrestrial laser-scanning.’ Available at http://cartesia.es/geodoc/isprs2004/comm5/papers/556.pdf [Verified 3 March 2008].

Barthélémy D, Caraglio Y (2007) Plant architecture: a dynamic, multilevel and domprehensive approach to plant form, structure and ontogeny. Annals of Botany 99, 375–407.
| Crossref | GoogleScholarGoogle Scholar | PubMed | [Verfied 10 August 2008].

Bucksch A , Appel van Wageningen H (2006) Skeletonization and segmentation of point clouds using octrees and graph theory. In ‘ISPRS Symposium: Image Engineering and Vision Metrology Vol. XXXVI. ISPRS Commission V Symposium.’ (Eds H-G Maas, D Schneider) pp. 1–6. (Dresden: Dresden University of Technology). Available at http://www.isprs.org/commission5/proceedings06/paper/1252_Dresden06.pdf [Verfied 10 August 2008].

Caraglio Y , Dabadie P (1988) ‘Le Peuplier quelques aspects de son architecture.’ Available at http://amap.cirad.fr/architecture/feuillus/peuplier.html [Verified 3 March 2008].

Castel T, Beaudoin A, Floury N, Le Toan T, Caraglio Y, Barczi JF (2001) Deriving forest parameters for backscatter models using the AMAP architectural plant model. IEEE Transactions on Geoscience and Remote Sensing 39, 571–583.
| Crossref | GoogleScholarGoogle Scholar | [Verified 3 July 2008].

Fröhlich C , Mettenleiter M (2004) Terrestrial laser-scanning – new perspectives in 3-D-surveying. Paper presented at the ISPRS Workshop ‘Laser-Scanners for Forest and Landscape Assessment’, Freiburg, Germany, 3–6 October 2004; Available at http://www.isprs.org/commission8/workshop_laser_forest/FROEHLICH.pdf [Verfied 10 August 2008].

Fröhlich C, Mettenleiter M, Härtl F, Dalton G, Hines D (2000) Imaging laser radar for 3-D modelling of real world environments. Sensor Review 20, 273–282.
| Crossref | GoogleScholarGoogle Scholar | [Verified 4 July 2008].

Gärtner H, Denier C (2006) Application of 3-D laser scanning device to acquire the structure of whole root systems. A pilot study. TRACE – Tree Rings in Archaeology, Climatology and Ecology 4, 288–294. [Verified 3 March 2008].

Godin C, Costes E, Caraglio Y (1997) Exploring plant topological structure with the AMAPmod software: an outline. Silva Fennica 31, 357–368. [Verified 3 March 2008].

Henning JG, Radtke PJ (2006) Detailed stem measurements of standing trees from ground-based scanning lidar. Forest Science 52, 67–80. [Verified 10 August 2008]

Pradal C , Boudon F , Nouguier C , Chopard J , Godin C (2007 a) PlantGL: a Python-based geometric library for 3-D plant modelling at different scales. Research report, 6367. Available at http://hal.inria.fr/inria-00191126/ [Verified 2 July 2008].

Pradal C , Dufour-Kowalski S , Boudon F , Dones N (2007 b) The architecture of OpenAlea: a visual programming and component based software for plant modelling. Paper presented at the 5th international workshop on functional structural plant models, Napier, New Zealand, 4–9 November 207. Available at http://algorithmicbotany.org/FSPM07/Individual/25.pdf [Verified 10 August 2008]

Sequeira V (1996) Active range sensing for three-dimensional environment reconstruction. PhD Thesis. Department of Electrical and Computer Engineering, IST-Technical University of Lisbon, Portugal.

Simonse M , Aschoff T , Spiecker H , Thies M (2003) Automatic determination of forest inventory parameters using terrestrial laser scanning. In ‘Proceedings of the ScandLaser Scientific Workshop on Airborne Laser Scanning of Forests, Umeå, Sweden’. pp. 251–257. Available at http://www.natscan.uni-freiburg.de/suite/pdf/030916_1643_1.pdf [Verified 3 March 2008].

Teobaldelli M , Zenone , Puig D , Matteucci M , Seufert G , Sequeira V (2007) Structural tree modelling of above and belowground poplar tree using direct and indirect measurements: terrestrial laser scanning, WGROGRA, AMAPmod and JRC-Reconstructor. Paper presented at the 5th international workshop on functional structural plant models, Napier, New Zealand, 4–9 November 2007. Available at http://algorithmicbotany.org/FSPM07/Individual/20.pdf [Verified 10 August 2008]

Teobaldelli M , Puig D (2006)Terrestrial laser scanner for monitoring land use and land use change and forestry under the Kyoto Protocol. Oral presentation. Technical meeting on specific forestry issues related to reporting and accounting under the Kyoto Protocol. Ispra (Va), Italy. Available at http://afoludata.jrc.it/events/Kyoto_technical_workshop/presentations/Teobaldelli_Puig.pdf [Verified 3 March 2008].

Thies M, Pfeifer N, Winterhalder D, Gorte BGH (2004) Three-dimensional reconstruction of stems for assessment of taper, sweep and lean based on laser scanning of standing trees. Scandinavian Journal of Forest Research 19, 571–581.
| Crossref | GoogleScholarGoogle Scholar | [Verified 10 August 2008]