Free Standard AU & NZ Shipping For All Book Orders Over $80!
Register      Login
Crop and Pasture Science Crop and Pasture Science Society
Plant sciences, sustainable farming systems and food quality
Shopping Cart: ( empty )
You are here: Home > Journals > CP > AR07068
RESEARCH ARTICLE
Contents Vol 59(1)

Genetic dissection of the relationship of apparent biological yield and apparent harvest index with seed yield and yield related traits in soybean

Shiyou Cui A B , Xiaohong He A , Sanxiong Fu A , Qingchang Meng A , Junyi Gai A and Deyue Yu A C
+ Author Affiliations
- Author Affiliations

A National Centre for Soybean Improvement, National Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China.

B Nantong Institute of Agricultural Sciences, Nantong Jiangsu 226541, China.

C Corresponding author. Email: dyyu@njau.edu.cn

Australian Journal of Agricultural Research 59(1) 86-93 https://doi.org/10.1071/AR07068
Submitted: 27 February 2007  Accepted: 26 September 2007   Published: 14 January 2008

Abstract

Improving seed yield is an important goal of soybean breeding programs. In this investigation, two sets of recombinant inbred line (RIL) populations with 184 and 151 RI lines derived from Kefeng No. 1 × Nannong 1138-2 (F7:11, NJRIKY) and Bogao × Nannong 94-156 (F7:10, NJ(SP)BN) were used to map QTLs for five agronomic and physiological traits including plant height (PH), days to maturity (MD), seed yield (SY), apparent biological yield (ABY) and apparent harvest index (AHI), and correlation analysis among the five traits were also conducted. 221 SSR markers and 248 markers were used to construct genetic maps in NJRIKY and NJ(SP)BN population, respectively. The QTL mapping was done with the program WinQTLCart. The results indicated there were 14 putative QTL significantly associated with five agronomic and physiological traits in two sets of RIL populations and several coincident QTLs associated to SY and it related traits were observed. For SY, two QTLs, qsyC2.1 mapped on LG-C2 in NJRIKY and qsyL.1 on LG-L in NJ(SP)BN coincided or neared with QTLs detected in previous reports, and one major SY QTLs were detected on LG-O in which none of QTLs for yield were identified before. QTLs for SY co-located with QTLs for ABY and/or AHI and these co-located QTLs in each of genomic regions all showed their additive effects in the same direction except for SY/AHI QTLs on LG-C2 in NJ(SP)BN. These revealed that SY increase could be genetically explained by either biological yield enhancement and/or harvest index improvement. It was also found that some QTLs for PH in both sets of RIL population co-located with some QTLs for yield and/or ABY, and all of the coincident showed the additive effects in the same direction, but none of the QTLs was found to co-locate to any of the AHI QTLs.

Additional keywords: quantitative trait loci (QTL), recombination inbred line (RIL).


Acknowledgments

This work was supported by National 973 project (2004CB117206, 2002CB111304), National 863 Projects (No. 2006AA10Z1C1), National Natural Science Foundation of China (No. 30490250, No. 30771362), and Jiangsu Provincial Natural Science Foundation (BK2004045).


References


Bhardwaj HL, Bhagsari AS (1990) Harvest index and related characteristics of small and large seeded soybean genotypes. Soybean Genetics Newsletter 17, 109–113. open url image1

Churchill AG, Doerge RW (1994) Empirical threshold values for quantitative trait mapping. Genetics 138, 963–971.
| PubMed |
open url image1

Cregan PB, Jarvik T, Bush AL, Shoemaker RC, Lark KG , et al. (1999) An integrated genetic linkage map of the soybean genome. Crop Science 39, 1464–1490. open url image1

Cregan PB, Yaklich RW (1986) Dry matter and nitrogen accumulation and partitioning in selected soybean genotypes of different derivation. Theoretical and Applied Genetics 72, 782–786.
| Crossref | GoogleScholarGoogle Scholar | open url image1

Cui SY, Meng QC, Huang F, Zhao TJ, Gai JY, Yu DY (2005) Genetic effects of brachytic stem on main agronomic traits and its mapping in soybean. Agricultural Sciences in China 4, 728–732. open url image1

Cui SY, Yu DY (2005) Estimates of relative contribution of biomass, harvest index and yield components to soybean yield improvements in China. Plant Breeding 124, 473–476.
| Crossref | GoogleScholarGoogle Scholar | open url image1

Donald CM (1962) In search of yield. Journal of the Australian Institute of Agricultural Science 28, 171–178. open url image1

Donald CM, Hamblin J (1976) The biological yield and harvest index of cereal as agronomic and plant breeding criteria. Advances in Agronomy 28, 361–405. open url image1

Dong Z , Qi MM , Sun ZT (1984) A study of the physiological parameters for high-yielding soybean plants. In ‘Proceedings of the 2nd US–China Soybean Symposium’. (Eds S Wong, R Nelson, W Wolf) pp. 77–86. (Dupont Far East Inc., Monsanto Far East Ltd., Pecten Chemicals Inc., Pioneer Hi-Breed International Inc., Potash & Phosphate Institute)

Faluyi MA (1990) Implications of selecting improved strains of soybeans for dry matter accumulation and grain yield. Euphytica 50, 197–201.
| Crossref | GoogleScholarGoogle Scholar | open url image1

Fehr WR , Caviness CE (1977) Stages of soybean development. Iowa Coop. Ext. Serv. Spec. Rep. 80. Iowa Agric. Home Econ. Exp. Station. Iowa State University, Ames, IA.

Feng QH, Zhang FN, Yang JY (1991) The genetic improvement prospect of soybean yield and relative characters in the variety replacement of summer soybean in the northern Huaibei region of Jiangsu Province. Soybean Science [in Chinese with English abstract] 10, 172–177. open url image1

Frederick JR , Hesketh JD (1994) Genetic improvement in soybean: physiological attributes. In ‘Genetic improvement of field crops’. (Ed. GA Slafer) pp. 237–286. (Marcel Dekker: New York)

Fu SX, Zhan Y, Zhi HJ, Gai JY, Yu DY (2006) Mapping of SMV resistant gene Rsc-7 on the soybean (Glycine max (L.) Merr.) genetic map by SSR markers. Genetica 128, 63–69.
| Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Hay RKM (1995) Harvest index: a review of its use in plant breeding and crop physiology. Annual Applied Biology 126, 197–216. open url image1

Kabelka EA, Diers BW, Fehr WR, LeRoy AR, Baianu IC, You T, Neece DJ, Nelson RL (2004) Putative alleles for increased yield from soybean plant introductions. Crop Science 44, 784–791. open url image1

Karmakar PG, Bhatnager PS (1996) Genetic improvement of soybean varieties released in India from 1969 to 1993. Euphytica 90, 95–103. open url image1

Lanceras JC, Grienggrai P, Boonrat J, Theerayut T (2004) Quantitative trait loci associated with drought tolerance at reproductive stage in rice. Plant Physiology 135, 384–399.
| Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Lee SH, Bailey MA, Mian MAR, Shipe ER, Ashley DA, Parrot WA, Hussey RS, Boerma HR (1996) Identification of quantitative trait loci for plant height, lodging, and maturity in a soybean population segregating for growth habit. Theoretical and Applied Genetics 92, 516–523.
| Crossref |
open url image1

Lincoln SE , Bailey SL (1993) MAPMAKER/EXP 3.0 and MAPMAKER/QTL 1.1. Technical Report. Whitehead Institute of Medical Research, Cambridge, MA.

Mansur LM, Lark KG, Kross H, Oliveira A (1996) Interval mapping of quantitative trait loci for reproductive, morphological, and seed traits of soybean (Glycine max L.). Theoretical and Applied Genetics 86, 907–913. open url image1

Mansur LM, Orf JH, Chase K, Jarvik T, Cregan PB, Lark KG (1998) Genetic mapping of agronomic traits using recombinant inbred lines of soybean. Crop Science 36, 1327–1336. open url image1

Mian MAR, Ashley DA, Boerma HR (1998) An additional QTL for water efficiency in soybean. Crop Science 38, 390–393. open url image1

Mian MAR, Bailey MA, Ashley DA, Wells R, Carter TE, Parrott WA, Boerma HR (1996) Molecular markers associated with water use efficiency and leaf ash in soybean. Crop Science 36, 1252–1257. open url image1

Molnar SJ, Rai S, Charette M, Cober ER (2003) Simple sequence repeat (SSR) markers linked to E1, E3, E4, and E7 maturity genes in soybean. Genome 46, 1024–1036.
| Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Morrison MJ, Voldeng HD, Cober ER (1999) Physiological changes from 58 years of genetic improvement of short-season soybean cultivars in Canada. Agronomy Journal 91, 685–689. open url image1

Mou TM , Lu XG (2001) Super hybrid rice breeding. In ‘Theory and techniques in two-line hybrid rice breeding’. (Eds XG Lu, MH Gu, CQ Li) pp. 133–146. (Science Press: Beijing)

Murray MG, Thompson WF (1980) Rapid isolation of high molecular weight plant DNA. Nucleic Acids Research 8, 4321–4325.
| Crossref | PubMed |
open url image1

Nyquist WE (1991) Estimation of heritability and prediction of selection response in plant populations. Critical Reviews in Plant Sciences 10, 235–322. open url image1

Orf JH, Chase K, Jarvik T, Mansur LM, Cregan PB, Adler FR, Lark KG (1999) Genetics of soybean agronomic traits. I. Comparison of three related recombinant rebred populations. Crop Science 39, 1642–1651. open url image1

Purcell LC , Specht JE (2004) Physiological traits for ameliorating drought stress. In ‘Soybeans: improvement, production, and uses’. 3rd edn (Eds HR Boerma, JE Specht) pp. 598–604. (American Society of Agronomy Inc., Crop Science Society of America Inc., Soil Science Society of America Inc.: Madison, WI)

SAS Institute (2001) ‘SAS, version 8.’ (SAS Institute: Cary, NC)

Schapaugh WT, Wilcox JR (1980) Relationships between harvest indices and other plant characteristics in soybeans. Crop Science 20, 529–533. open url image1

Song QJ, Marek LF, Shoemaker RC, Lark KG, Concibido VC, Delannay X, Specht JE, Cregan PB (2004) A new integrated genetic linkage map of the soybean. Theoretical and Applied Genetics 109, 122–128.
| Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

SoyBase (2005) Knowledge and tools for soybean breeders and researchers. Available at: http://soybase.org. [verified 10 October 2006].

Specht JE, Chase K, Macrander M, Graef GL, Chung JU, Markwell JP, Germann M, Orf JH, Lark KG (2001) Soybean response to water: a QTL analysis of drought tolerance. Crop Science 41, 493–509. open url image1

Tasma IM, Lorenzen LL, Green DE, Shoemaker RC (2001) Mapping genetic loci for flowering time, maturity, and photoperiod insensitivity in soybean. Molecular Breeding 8, 25–35.
| Crossref | GoogleScholarGoogle Scholar | open url image1

Tasma IM, Shoemaker RC (2003) Mapping flowering time gene homologs in soybean and their association with maturity (E) loci. Crop Science 43, 319–328. open url image1

Wang SC , Basten CJ , Zeng ZB (2005) Windows QTL Cartographer v 2.5. Department of Statistics, North Carolina State University, Raleigh, NC. Available at: http://statgen.ncsu.edu/qtlcart/WQTLCart.htm.

Wang YJ (2001) Establishment and adjustment of RIL population and its application to map construction, mapping genes resistant to SMV and QTL analysis of agronomic and quality traits in soybeans. PhD thesis, Nanjing Agricultural University, China.

Yuan J, Njiti VN, Melsem K, Iqbal JJ, Triwitayakorn K, Kassem MA, Davis GT, Schmidt ME, Lightfoot DA (2002) Quantitative trait loci in two soybean recombinant inbred line populations segregating for yield and disease resistance. Crop Science 42, 271–277.
| PubMed |
open url image1

Zhang WK, Wang YJ, Luo GZ, Zhang JS, He CY, Wu XL, Gai JY, Chen SY (2004b) QTL mapping of ten agronomic traits on the soybean (Glycine max L. Merr.) genetic map and their association with EST markers. Theoretical and Applied Genetics 108, 1131–1139.
| Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Zhang ZH, Li P, Wang LX, Hu ZL, Zhu LH, Zhu YG (2004a) Genetic dissection of the relationship of biomass production and partitioning with yield and yield related traits in rice. Plant Science 167, 1–8.
| Crossref | GoogleScholarGoogle Scholar | open url image1