Free Standard AU & NZ Shipping For All Book Orders Over $80!
Register      Login
Crop and Pasture Science Crop and Pasture Science Society
Plant sciences, sustainable farming systems and food quality
RESEARCH ARTICLE

Challenges for sustainable cereal rust control in South Africa

Z. A. Pretorius A F , K. W. Pakendorf B , G. F. Marais C , R. Prins A D and J. S. Komen E
+ Author Affiliations
- Author Affiliations

A Department of Plant Sciences, University of the Free State, Bloemfontein 9300, South Africa.

B ARC-Small Grain Institute, PO Box 3507, Matieland 7602, South Africa.

C Department of Genetics, University of Stellenbosch, Private Bag X01, Matieland 7602, South Africa.

D CenGen, 78 Fairbairn Street, Worcester 6850, South Africa.

E Pannar, PO Box 17164, Bainsvlei 9338, South Africa.

F Corresponding author. Email: pretorza.sci@ufs.ac.za

Australian Journal of Agricultural Research 58(6) 593-601 https://doi.org/10.1071/AR06144
Submitted: 10 May 2006  Accepted: 18 January 2007   Published: 26 June 2007

Abstract

The cultivation of small grain cereals was introduced to South Africa by Dutch settlers in the 17th Century. According to historical records the first documented epidemic of wheat stem rust occurred in the south-western parts of the current Western Cape in 1726. Recurring stem and leaf rust epidemics were associated with expanding wheat production and became particularly severe in the winter-rainfall regions of the Western and Eastern Cape, as well as in the summer-rainfall regions of the Free State. The wheat stripe rust pathogen was first detected in South Africa in 1996. Due to susceptibility of cultivars at the time of this exotic introduction, stripe rust has caused significant losses in commercial wheat production over the past 10 years. Pathotype surveys of Puccinia graminis and P. triticina were initiated in the 1920s, but were discontinued until research on wheat stem rust was resumed in the 1960s. Recent evidence has shown that P. graminis f. sp. tritici continues to evolve. In addition, the annual number of wheat stem rust collections is increasing, emphasising the sustained threat of this damaging pathogen. A stem rust pathotype first detected in 2000, with newly acquired virulence for Sr8b and Sr38, currently constitutes more than 80% of all collections. Leaf and stem rust diseases also occur on barley, oat, triticale, and rye and are important production constraints in several regions. Some studies have described variability in these pathogens but long-term records of pathogenicity changes in barley and oat rust are not available. Cereal rust diseases have clearly played an important role in South African agriculture and many production regions remain favourable for rust development. Current expertise in cereal rusts covers most technologies necessary to study the respective host–pathogen systems. However, a general lack of capacity and fragmentation of research groups prevent a unified approach and remain a challenge for sustainable cereal rust control in South Africa. A national strategy for cereal rust control, with particular emphasis on pathogen and host resources, and breeding for resistance, is urgently needed.

Additional keywords: barley, oat, Puccinia, resistance, wheat.


Acknowledgments

The ARC-Small Grain Institute, Bethlehem, South Africa, is thanked for use of unpublished information.


References


Anon. (2005) Sounding the alarm on global stem rust. An assessment of race Ug99 in Kenya and Ethiopia and the potential for impact in neighboring regions and beyond. Report by an expert panel on the stem rust outbreak in Eastern Africa, CIMMYT, Mexico.

Boshoff WHP, Van Niekerk BD, Pretorius ZA (2000) Pathotypes of Puccinia graminis f. sp. tritici detected in South Africa during 1991–1997. South African Journal of Plant and Soil 17, 60–62. open url image1

Boshoff WHP, Pretorius ZA, Van Niekerk BD (2002a) Impact of leaf rust on spring wheat in the winter rainfall region of South Africa. South African Journal of Plant and Soil 19, 84–88. open url image1

Boshoff WHP, Pretorius ZA, Van Niekerk BD (2002b) Establishment, distribution and pathogenicity of Puccinia striiformis f. sp. tritici in South Africa. Plant Disease 86, 485–492.
Crossref | GoogleScholarGoogle Scholar | open url image1

Boshoff WHP, Pretorius ZA, Van Niekerk BD (2002c) Resistance in South African and foreign wheat cultivars to pathotypes 6E16A- and 6E22A- of Puccinia striiformis f. sp. tritici. South African Journal of Plant and Soil 19, 27–36. open url image1

Boshoff WHP, Pretorius ZA, Van Niekerk BD (2003) Fungicide efficacy and the impact of stripe rust on spring and winter wheat in South Africa. South African Journal of Plant and Soil 20, 11–17. open url image1

Boshoff WHP, Pretorius ZA, Van Niekerk BD, Komen JS (2002d) First report of virulence in Puccinia graminis f. sp. tritici to wheat stem rust resistance genes Sr8b and Sr38 in South Africa. Plant Disease 86, 992.
Crossref | GoogleScholarGoogle Scholar | open url image1

Boyd LA (2005) Centenary review: can Robigus defeat an old enemy?—Yellow rust of wheat. Journal of Agricultural Science 143, 233–243.
Crossref | GoogleScholarGoogle Scholar | open url image1

Chong J, Leonard KJ, Salmeron JJ (2000) A North American system of nomenclature for Puccinia coronata f. sp. avenae. Plant Disease 84, 580–585.
Crossref | GoogleScholarGoogle Scholar | open url image1

Collard BCY, Jahufer MZZ, Brouwer JB, Pang ECK (2005) An introduction to markers, quantitative trait loci (QTL) mapping and marker-assisted selection for crop improvement: the basic concepts. Euphytica 142, 169–196.
Crossref | GoogleScholarGoogle Scholar | open url image1

Edwards IB (2002) The South African Winter Grain Research Programme—an evaluation of the current status and future research priorities. Report to Winter Cereal Trust, Pretoria.

Groenewald JZ, Fourie M, Marais AS, Marais GF (2005) Extension and use of a physical map of the Thinopyrum-derived Lr19 translocation. Theoretical and Applied Genetics 112, 131–138.
Crossref | PubMed |
open url image1

Hoisington D , Bohorova N , Fennell S , Khairallah M , Pellegrineschi A , Ribaut JM (2002) The application of biotechnology to wheat improvement In ‘Bread wheat. Improvement and production’. FAO Plant Production and Protection Series No. 30. (Eds B Curtis, S Rajaram, H. Gómez Macpherson) (FAO: Rome)

Huerta-Espino J, Singh RP (1994) First report of virulence to wheat with leaf rust resistance gene Lr19 in Mexico. Plant Disease 78, 640. open url image1

de Jager JNW (1980) ‘n Oorsig oor die koringsiektesituasie in Suid-Afrika, met spesiale verwysing na stamroes, en oorwegings vir ‘n nasionale koringsiekteprogram. PhD thesis, University of Stellenbosch, South Africa.

Langridge P, Lagudah ES, Holton TA, Appels R, Sharp PJ, Chalmers KJ (2001) Trends in genetic and genome analyses in wheat: a review. Australian Journal of Agricultural Research 52, 1043–1077.
Crossref | GoogleScholarGoogle Scholar | open url image1

Le Roux J (1986) Studies on the pathogenicity of Puccinia graminis f. sp. tritici and the nature of host resistance in wheat. PhD thesis, University of Natal, South Africa.

Le Roux J (1989) Physiologic specialization of Puccina graminis f. sp. tritici in Southern Africa during 1986–1987. Phytophylactica 21, 255–258. open url image1

Le Roux J, Rijkenberg FHJ (1987a) Pathotypes of Puccinia graminis f. sp. tritici with increased virulence for Sr24. Plant Disease 71, 1115–1119.
Crossref | GoogleScholarGoogle Scholar | open url image1

Le Roux J, Rijkenberg FHJ (1987b) Occurrence and pathogenicity of Puccinia graminis f. sp. tritici in South Africa during the period 1981–1985. Phytophylactica 19, 467–472. open url image1

Le Roux J, Rijkenberg FHJ (1988) Inheritance of resistance to Puccinia graminis f. sp. tritici in South African wheat: I. Spring cultivars. Phytophylactica 20, 327–331. open url image1

Le Roux J, Rijkenberg FHJ (1989) Inheritance of resistance to Puccinia graminis f. sp. tritici in South African wheat: II. Winter cultivars. Phytophylactica 21, 55–59. open url image1

Lombard B (1963) ‘n Studie oor die erflike grondslag van stamroesweerstand by koring. MSc thesis, University of Stellenbosch, South Africa.

Lombard B (1986) Host–pathogen interactions involving wheat and Puccinia graminis tritici in South Africa. PhD thesis, University of Stellenbosch, South Africa.

Lombard B, Lombard M (1965) The racial identity of wheat stem rust in the Republic of South Africa. South African Journal of Agricultural Science 8, 603–604. open url image1

Marais GF (1992a) Gamma-irradiation induced deletions in an alien chromosome segment of the wheat Indis and their use in gene mapping. Genome 35, 225–229.
PubMed |
open url image1

Marais GF (1992b) The modification of a common wheat-Thinopyrum distichum translocated chromosome with a locus homoeoallelic to Lr19. Theoretical and Applied Genetics 85, 73–78.
Crossref | GoogleScholarGoogle Scholar | open url image1

Marais GF , Botes WC (2003) Recurrent mass selection as a means to pyramid major genes for pest resistance in spring wheat. In ‘Proceedings of the 10th International Wheat Genetics Symposium’. 1–6 September, Paestum, Italy. (Eds NE Pogna, M Romanò, EA Pogna, G Galterio) pp. 757–759.

Marais GF, Botes WC, Louw JH (2000) Recurrent selection making use of male sterility and hydroponic tiller culture in pedigree breeding of wheat. Plant Breeding 119, 440–442.
Crossref | GoogleScholarGoogle Scholar | open url image1

Marais GF, Botes WC, Louw JH (2001a) Wheat breeding based on recurrent mass selection. Cereal Research Communications 29, 339–342. open url image1

Marais GF, Marais AS, Groenewald JZ (2001b) Evaluation and reduction of Lr19-149, a recombined from of the Lr19 translocation of wheat. Euphytica 121, 289–295.
Crossref | GoogleScholarGoogle Scholar | open url image1

Marais GF, Pretorius ZA, Marais AS, Wellings CR (2003) Transfer of rust resistance genes from Triticum species to common wheat. South African Journal of Plant and Soil 20, 193–198. open url image1

Pakendorf KW (1977) A study of the efficiency of current methods of breeding and testing for wheat improvement in the Western Cape Province. PhD thesis, University of Stellenbosch, South Africa.

du Plessis AJ (1933) Die geskiedenis van die graankultuur in Suid-Afrika, 1652–1752. Annals of the University of Stellenbosch 9B, open url image1

Pretorius ZA (1983) Disease progress and yield response in spring wheat cultivars and lines infected with Puccinia graminis f. sp. tritici. Phytophylactica 15, 35–45. open url image1

Pretorius ZA (1997) Detection of virulence to Lr41 in a South African pathotype of Puccinia recondita f. sp. tritici. Plant Disease 81, 423.
Crossref | GoogleScholarGoogle Scholar | open url image1

Pretorius ZA, Boshoff WHP, Kema GHJ (1997) First report of Puccinia striiformis f. sp. tritici on wheat in South Africa. Plant Disease 81, 424.
Crossref | GoogleScholarGoogle Scholar | open url image1

Pretorius ZA , Kloppers FJ , Van Niekerk DB (1996) Wheat leaf rust resistance in South Africa: present status and future prospects. In ‘The 9th Regional Workshop for Eastern, Central and Southern Africa, Addis Ababa, Ethiopia’. (Eds DG Tanner, TS Payne, OS Abdalla) pp. 440–445.

Pretorius ZA, Le Roux J (1988) Occurrence and pathogenicity of Puccinia recondita f. sp. tritici in South Africa during 1986 and 1987. Phytophylactica 20, 349–352. open url image1

Pretorius ZA, Le Roux J, Drijepondt SC (1990) Occurrence and pathogenicity of Puccinia recondita f. sp. tritici on wheat in South Africa during 1988. Phytophylactica 22, 225–228. open url image1

Pretorius ZA, Rijkenberg FHJ, Wilcoxson RD (1987) Occurrence and pathogenicity of Puccinia recondita f. sp. tritici on wheat in South Africa from 1983 through 1985. Plant Disease 71, 1133–1137.
Crossref | GoogleScholarGoogle Scholar | open url image1

Pretorius ZA, Singh RP, Wagoire WW, Payne TS (2000) Detection of virulence to wheat stem rust resistance gene Sr31 in Puccinia graminis f. sp. tritici in Uganda. Plant Disease 84, 203.
Crossref | GoogleScholarGoogle Scholar | open url image1

Prins R, Groenewald JZ, Marais GF, Snape JW, Koebner RMD (2001) AFLP and STS tagging of Lr19, a gene conferring resistance to leaf rust in wheat. Theoretical and Applied Genetics 103, 618–624.
Crossref | GoogleScholarGoogle Scholar | open url image1

Prins R, Marais GF (1998) An extended deletion map of the Lr19 translocation and modified forms. Euphytica 103, 95–102.
Crossref | GoogleScholarGoogle Scholar | open url image1

Prins R, Marais GF, Janse BJH, Pretorius ZA, Marais AS (1996) A physical map of the Thinopyrum-derived Lr19 translocation. Genome 39, 1013–1019. open url image1

Prins R, Marais GF, Pretorius ZA, Janse BJH, Marais AS (1997) A study of modified forms of the Lr19 translocation of common wheat. Theoretical and Applied Genetics 95, 424–430.
Crossref | GoogleScholarGoogle Scholar | open url image1

Prins R, Ramburan VP, Pretorius ZA, Boyd LA, Boshoff WHP, Smith PH, Louw JH (2005) Development of a doubled haploid mapping population and linkage map for the bread wheat cross Kariega × Avocet S. South African Journal of Plant and Soil 22, 1–8. open url image1

Rajaram S , Borlaug NE , van Ginkel M (2002) CIMMYT international wheat breeding. In ‘Bread wheat: improvement and production’. FAO Plant Production Series 30. (Eds BC Curtis, S Rajaram, H Gomez Macpherson) (FAO: Rome)

Ramburan VP, Pretorius ZA, Louw JH, Boyd LA, Smith PH, Boshoff WHP, Prins R (2004) A genetic analysis of adult plant resistance to stripe rust in the wheat cultivar Kariega. Theoretical and Applied Genetics 108, 1426–1433.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Rossouw DJ, Truter JA (1967) Races of crown rust in South Africa. South African Journal of Agricultural Science 10, 1065–1066. open url image1

Singh RP , Rajaram S (2002) Breeding for disease resistance in wheat. In ‘Bread wheat: improvement and production’. FAO Plant Production Series 30. (Eds BC Curtis, S Rajaram, H Gomez Macpherson) (FAO: Rome)

Smith J, Le Roux J (1992) First report of wheat stem rust virulence for Sr27 in South Africa. Vorträge für Pflanzenzüchtung 24, 109–110. open url image1

Van Niekerk BD, Pretorius ZA, Boshoff WHP (2001a) Potential yield losses caused by barley leaf rust and oat leaf and stem rust to South African barley and oat cultivars. South African Journal of Plant and Soil 18, 108–113. open url image1

Van Niekerk BD, Pretorius ZA, Boshoff WHP (2001b) Occurrence and pathogenicity of Puccinia hordei on barley in South Africa. Plant Disease 85, 713–717.
Crossref | GoogleScholarGoogle Scholar | open url image1

Van Niekerk BD, Pretorius ZA, Boshoff WHP (2001c) Pathogenic variability of Puccinia coronata f. sp. avenae and P. graminis f. sp. avenae on oat in South Africa. Plant Disease 85, 1085–1090.
Crossref | GoogleScholarGoogle Scholar | open url image1

Verwoerd L (1931) Die fisiologiese vorms van Puccinia graminis Pers. wat in Suid-Afrika voorkom. South African Journal of Science 28, 274–279. open url image1

Verwoerd L (1935) The distribution and prevalence of physiologic forms of Puccinia graminis tritici in the Union of South Africa. Annals of the University of Stellenbosch 13A, 1–7. open url image1

Verwoerd L (1937) Die physiologiese rasse van Puccinia triticina Eriks. wat in Suid-Afrika voorkom. South African Journal of Science 33, 648–652. open url image1

Watson IA, Luig NH (1963) The classification of Puccinia graminis var. tritici in relation to breeding resistant varieties. Proceedings of Linnean Society of NSW 88, 235–258. open url image1

Zhang W, Lukaszewski AJ, Kolmer J, Soria MA, Goyal S, Dubcovsky J (2005) Molecular characterization of durum and common wheat recombinant lines carrying leaf rust resistance (Lr19) and yellow pigment (Y) genes from Lophopyrum ponticum. Theoretical and Applied Genetics 111, 573–582.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1