Circadian activity of the swamp rat (Rattus lutreolus) in South Central Victoria

References

Agafonkin, V., and Thieurrmel, B. (2018). suncalc: Compute Sun Position, Sunlight Phases, Moon Position and Lunar Phase. DataStorm. Available at https://github.com/datastorm-open/suncalc [Accessed 18 March 2019].

Anderson, S. R., and Wiens, J. J. (2017). Out of the dark: 350 million years of conservatism and evolution in diel activity patterns in vertebrates. Evolution 71, 1944–1959.
| Out of the dark: 350 million years of conservatism and evolution in diel activity patterns in vertebrates.Crossref | GoogleScholarGoogle Scholar | 28636789PubMed |

Baath, R. (2014). Bayesian first aid: a package that implements Bayesian alternatives to the classical *.test functions in R. In The proceedings of UseR! 2014 - the International R User Conference. Available at http://sumsar.net/files/academia/baath_user14_abstract.pdf.

Banks, P. B., and Hughes, N. K. (2012). A review of the evidence for potential impacts of black rats (Rattus rattus) on wildlife and humans in Australia. Wildlife Research 39, 78–88.
| A review of the evidence for potential impacts of black rats (Rattus rattus) on wildlife and humans in Australia.Crossref | GoogleScholarGoogle Scholar |

Banks, P. B., and Smith, H. M. (2015). The ecological impacts of commensal species: black rats, Rattus rattus, at the urban–bushland interface. Wildlife Research 42, 86–97.
| The ecological impacts of commensal species: black rats, Rattus rattus, at the urban–bushland interface.Crossref | GoogleScholarGoogle Scholar |

Bennie, J. J., Duffy, J. P., Inger, R., and Gaston, K. J. (2014). Biogeography of time partitioning in mammals. PNAS 111, 13727–13732.
| Biogeography of time partitioning in mammals.Crossref | GoogleScholarGoogle Scholar | 25225371PubMed |

Braithwaite, R. W. (1977). Preliminary observations on the activity patterns of Rattus lutreolus and other Victorian small mammals. Victorian Naturalist 94, 216–218.

Braithwaite  R. W. (1978 ). The ecology and evolution of Rattus lutreolus. PhD thesis. Monash University, Melbourne.

Braithwaite, R. W., and Gullan, P. K. (1978). Habitat selection by small mammals in a Victorian heathland. Australian Journal of Ecology 3, 109–127.
| Habitat selection by small mammals in a Victorian heathland.Crossref | GoogleScholarGoogle Scholar |

Coates, T. D. (1995). Reproductive ecology of the yellow-footed antechinus, Antechinus flavipes (Waterhouse), in north east Victoria. PhD thesis. Monash University, Melbourne.

Coates, T. D. (2008). The effect of fox control on mammal population in an outer urban conservation reserve. Australian Mammalogy 30, 51–63.
| The effect of fox control on mammal population in an outer urban conservation reserve.Crossref | GoogleScholarGoogle Scholar |

Coates, T. D. (2013). The performance of wombat gates in controlling wildlife movement through a predator fence. Australian Mammalogy 35, 184–187.
| The performance of wombat gates in controlling wildlife movement through a predator fence.Crossref | GoogleScholarGoogle Scholar |

Coates, T., and Wright, C. (2003). Predation of southern brown bandicoots Isoodon obesulus by the European red fox, Vulpes vulpes in south-east Victoria. Australian Mammalogy 25, 107–110.
| Predation of southern brown bandicoots Isoodon obesulus by the European red fox, Vulpes vulpes in south-east Victoria.Crossref | GoogleScholarGoogle Scholar |

Coates, T., and Wright, C. (2004). A technique for evaluating the effectiveness of fences against foxes using marked baits. Ecological Management & Restoration 5, 145–147.
| A technique for evaluating the effectiveness of fences against foxes using marked baits.Crossref | GoogleScholarGoogle Scholar |

Coates, T. D., and Harris, K. (2008). Birds of the Royal Boatanic Gardens, Cranbourne. Corella 32, 1–16.

Coates, T. D., Nicholls, D. N., and Willig, R. (2008). The distribution of the southern brown bandicoot, Isoodon obesulus in south central Victoria. Victorian Naturalist 125, 128–139.

Dickman, C. R., and Watts, C. H. S. (2008). Black Rat, Rattus rattus. In ‘The mammals of Australia’. (Eds S. Van Dyke, and S. Strahan). pp. 707–709. (New Holland Publishers: Sydney, NSW).

DSE (2005) Native Vegetation – Modelled 2005 Ecological Vegetation Classes (with Bioregional Conservation Status). Department of Sustainability and Environment, Melbourne, Vic.

Eppley, T. M., Watzek, J., Ganzhorn, J. U., and Donati, G. (2017). Predator avoidance and dietary fibre predict diurnality in the cathemeral folivore, Hapalemur meridionalis. Behavioural Ecology and Sociobiology 71, .
| Predator avoidance and dietary fibre predict diurnality in the cathemeral folivore, Hapalemur meridionalis.Crossref | GoogleScholarGoogle Scholar |

Fox, B. J., and Monamy, V. (2007). A review of habitat selection by the swamp rat, Rattus lutreolus (Rodentia: Muridae). Austral Ecology 32, 837–849.
| A review of habitat selection by the swamp rat, Rattus lutreolus (Rodentia: Muridae).Crossref | GoogleScholarGoogle Scholar |

Frey, S., Fisher, J. T., Burton, A. C., and Volpe, J. P. (2017). Investigating animal activity patterns and temporal niche partitioning using camera-trap data: challenges and opportunities. Remote Sensing in Ecology and Conservation 3, 123–132.
| Investigating animal activity patterns and temporal niche partitioning using camera-trap data: challenges and opportunities.Crossref | GoogleScholarGoogle Scholar |

Gaynor, K. M., Hojnowski, C. E., Carter, N. H., and Brashares, J. S. (2018). The influence of human disturbance on wildlife nocturnality. Science 360, 1232–1235.
| The influence of human disturbance on wildlife nocturnality.Crossref | GoogleScholarGoogle Scholar | 29903973PubMed |

Gerkema, M. P., Davies, W. I. L., Foster, R. G., Menaker, M., and Hut, R. A. (2013). The nocturnal bottleneck and the evolution of activity patterns in mammals. Proceedings of the Royal Society B: Biological Sciences 280, 1–11.
| The nocturnal bottleneck and the evolution of activity patterns in mammals.Crossref | GoogleScholarGoogle Scholar |

Gleen, W. K. (2013). Life on the edge: Population and behavioural responses of the native bush rat to invasive species at the urban edge. MSc Thesis, University of Sydney, Sydney.

Green, R. H. (1967). The murids and small dasyurids in Tasmania. Parts 1 and 2. Records of the Queen Victoria Museum 28, 1–9.

Halle, S. (2006). Polyphasic Activity Patterns in Small Mammals. Folia Primatologica. 77, 15–26

Harrington, L. A., Harrington, A. L., and Yamaguchi, N. (2009). The impact of native competitors on an alien invasive: temporal niche shifts to avoid interspecific aggression. Ecology 90, 1207–1216.
| The impact of native competitors on an alien invasive: temporal niche shifts to avoid interspecific aggression.Crossref | GoogleScholarGoogle Scholar | 19537542PubMed |

Hill, R. A. (2006). Why be diurnal? Or, why not be cathemeral? Folia Primatologica (Basel) 77, 72–86.
| Why be diurnal? Or, why not be cathemeral?Crossref | GoogleScholarGoogle Scholar |

Hut, R. A., Pilorz, V., Boerema, A. S., Strijkstra, A. M., and Daan, S. (2011). Working for food shifts nocturnal mouse activity into the day. PLoS One 6, e17527.
| Working for food shifts nocturnal mouse activity into the day.Crossref | GoogleScholarGoogle Scholar |

Ikeda, T., Uchida, K., Matsuura, Y., et al. (2016). Seasonal and diel activity patterns of eight sympatric mammals in northern Japan revealed by an intensive camera-trap survey. PLOS ONE 11, e0163602.
| Seasonal and diel activity patterns of eight sympatric mammals in northern Japan revealed by an intensive camera-trap survey.Crossref | GoogleScholarGoogle Scholar | 27732611PubMed |

Jacob, J., and Brown, J. S. (2000). Microhabitat use, giving-up densities and temporal activity as short- and long-term anti-predator behaviours in common voles. Oikos 91, 131–138.
| Microhabitat use, giving-up densities and temporal activity as short- and long-term anti-predator behaviours in common voles.Crossref | GoogleScholarGoogle Scholar |

Kearney, N., Handasyde, K., Ward, S., and Kearney, M. (2007). Fine-scale microhabitat selection for dense vegetation in a heathland rodent, Rattus lutreolus: insights from intraspecific and temporal patterns. Austral Ecology 32, 315–325.
| Fine-scale microhabitat selection for dense vegetation in a heathland rodent, Rattus lutreolus: insights from intraspecific and temporal patterns.Crossref | GoogleScholarGoogle Scholar |

Kortner, G., and Geiser, F. (1995). Body temperature rhythms and activity in reproductive Antechinus (Marsupialia). Physiology and Behavior 58, 31–36.
| Body temperature rhythms and activity in reproductive Antechinus (Marsupialia).Crossref | GoogleScholarGoogle Scholar | 7667424PubMed |

Kronfeld-Schor, N., Visser, M. E., Salis, L., and van Gils, J. A. (2017). Chronobiology of interspecific interactions in a changing world. Philosophical Transactions of the Royal Society B: Biological Sciences 372, 20160248.
| Chronobiology of interspecific interactions in a changing world.Crossref | GoogleScholarGoogle Scholar |

Levy, O., Dayan, T., Porter, W. P., and Kronfeld-Schor, N. (2019). Time and ecological resilience: can diurnal animals compensate for climate change by shifting to nocturnal activity? Ecological Monographs 89, e01334.
| Time and ecological resilience: can diurnal animals compensate for climate change by shifting to nocturnal activity?Crossref | GoogleScholarGoogle Scholar |

Lobert, B. (1990). Home range and activity period of the southern brown bandicoot (Isoodon obesulus) in a Victorian heathland. In ‘Bandicoots and bilbies’. (Eds J. H. Seebeck, P. R. Brown, R. L. Wallis and C. M. Kemper) pp. 319–325. (Surrey Beatty & Sons: Chipping Norton, New South Wales.)

MacLagan, S. J., Coates, T., and Ritchie, E. G. (2018). Don’t judge habitat on its novelty: Assessing the value of novel habitats for an endangered mammal in a peri-urban landscape. Biological Conservation 223, 11–18.
| Don’t judge habitat on its novelty: Assessing the value of novel habitats for an endangered mammal in a peri-urban landscape.Crossref | GoogleScholarGoogle Scholar |

Maor, R., Dayan, T., Ferguson-Gow, H., and Jones, K. E. (2017). Temporal niche expansion in mammals from a nocturnal ancestor after dinosaur extinction. Nature Ecology & Evolution 1, 1889–1895.
| Temporal niche expansion in mammals from a nocturnal ancestor after dinosaur extinction.Crossref | GoogleScholarGoogle Scholar |

Meek, P. D., Zewe, F., and Falzon, G. (2012). Temporal activity patterns of the swamp rat (Rattus lutreolus) and other rodents in north-eastern New South Wales, Australia. Australian Mammalogy 34, 223–233.
| Temporal activity patterns of the swamp rat (Rattus lutreolus) and other rodents in north-eastern New South Wales, Australia.Crossref | GoogleScholarGoogle Scholar |

Nichols, C. A., and Alexander, K. (2018). Creeping in the night: What might ecologists be missing? PLoS One 13, e0198277.
| Creeping in the night: What might ecologists be missing?Crossref | GoogleScholarGoogle Scholar | 29897948PubMed |

Nicholls, D. N., Coates, T. D., and Ibbertson, S. A. (2018). Assessment of the monitoring of ground-dwelling mammals in northern Western Port, Victoria. The Victorian Naturalist 135, 96–107.

Oates, A., and Taranto, M. (2001). ‘Vegetation mapping of the Port Phillip and Westernport region.’ (Department of Natural Resources and Environment: Melbourne.)

Ogurtsov, S. S., Zheltukhin Anatoliy, S., and Kotlov Ivan, P. (2018). Daily activity of the European badger (Meles meles, Mustelidae, Carnivora) on setts in Darwin Reserve and Meschera National Park (Russia) in summer and autumn. Nature Conservation Research 3, 68–88.

Pavey, C. R., Burwell, C. J., Körtner, G., and Geiser, F. (2016). Why is the marsupial kaluta, Dasykaluta rosamondae, diurnally active in winter: foraging advantages or predator avoidance in arid northern Australia? Journal of Arid Environments 133, 25–28.
| Why is the marsupial kaluta, Dasykaluta rosamondae, diurnally active in winter: foraging advantages or predator avoidance in arid northern Australia?Crossref | GoogleScholarGoogle Scholar |

Prugh, L. R., and Golden, C. D. (2014). Does moonlight increase predation risk? Meta-analysis reveals divergent responses of nocturnal mammals to lunar cycles. Journal of Animal Ecology 83, 504–514.
| Does moonlight increase predation risk? Meta-analysis reveals divergent responses of nocturnal mammals to lunar cycles.Crossref | GoogleScholarGoogle Scholar |

R Core Team (2017). ‘R: a language and environment for statistical computing.’ (R Foundation for Statistical Computing, Vienna, Austria.)

Roll, U., Dayan, T., and Kronfeld-Schor, N. (2006). On the role of phylogeny in determining activity patterns of rodents. Evolutionary Ecology 20, 479–490.
| On the role of phylogeny in determining activity patterns of rodents.Crossref | GoogleScholarGoogle Scholar |

Rowcliffe, J. M. (2016). activity: Animal Activity Statistics. R package version 1.1. Available from: http://CRAN.R-project.

Sale, M. G., and Arnould, J. P. Y. (2009). Spatial and temporal organisation in the swamp antechinus: comparison between island and mainland populations. Journal of Mammalogy 90, 347–355.
| Spatial and temporal organisation in the swamp antechinus: comparison between island and mainland populations.Crossref | GoogleScholarGoogle Scholar |

Shkolnik, A. (1971). Diurnal activity in a small desert rodent. International Journal of Biometeorology 15, 115–120.
| Diurnal activity in a small desert rodent.Crossref | GoogleScholarGoogle Scholar | 5146797PubMed |

Southwell, D. M., Lechner, A. M., Coates, T., and Wintle, B. A. (2008). The sensitivity of population viability analysis to uncertainty about habitat requirements: implications for the management of the endangered southern brown bandicoot. Conservation Biology 22, 1045–1054.
| The sensitivity of population viability analysis to uncertainty about habitat requirements: implications for the management of the endangered southern brown bandicoot.Crossref | GoogleScholarGoogle Scholar | 18477023PubMed |

Stokes, V. L., Pech, R. P., Banks, P. B., and Arthur, A. D. (2004). Foraging behaviour and habitat use by Antechinus flavipes and Sminthopsis murina (Marsupialia: Dasyuridae) in response to predation risk in eucalypt woodland. Biological Conservation 117, 331–342.
| Foraging behaviour and habitat use by Antechinus flavipes and Sminthopsis murina (Marsupialia: Dasyuridae) in response to predation risk in eucalypt woodland.Crossref | GoogleScholarGoogle Scholar |

Stokes, V. L., Banks, P. B., Pech, R. P., and Spratt, D. M. (2009). Competition in an invaded rodent community reveals black rats as a threat to native bush rats in littoral rainforest of south-east Australia. Journal of Applied Ecology 46, 1239–1247.
| Competition in an invaded rodent community reveals black rats as a threat to native bush rats in littoral rainforest of south-east Australia.Crossref | GoogleScholarGoogle Scholar |

Troughton, E., and Cayley, N. W. (1962). ‘Furred animals of Australia.’ (Angus & Robertson: Sydney.)

van der Vinne, V., Riede, S. J., Gorter, J. A., Eijer, W. G., Sellix, M. T., Menaker, M., Daan, S., Pilorz, V., and Hut, R. A. (2014). Cold and hunger induce diurnality in a nocturnal mammal. Proceedings of the National Academy of Science 111, 15256–15260.
| Cold and hunger induce diurnality in a nocturnal mammal.Crossref | GoogleScholarGoogle Scholar |

van der Vinne, V., Gorter, J. A., Riede, S. J., and Hut, R. A. (2015). Diurnality as an energy-saving strategy: energetic consequences of temporal niche switching in small mammals. Journal of Experimental Biology 218, 2585–2593.
| Diurnality as an energy-saving strategy: energetic consequences of temporal niche switching in small mammals.Crossref | GoogleScholarGoogle Scholar |

Van Dyck, S., and Strahan, R. (2008). ‘The mammals of Australia’, 3rd edn. (New Holland Publishers: Sydney.)

Watts, C. H. S., and Aslin, H. J. (1981). ‘The rodents of Australia.’ (Angus & Robertson: Sydney.)