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Aqueous lead speciation determined using the DNAzyme GR5

Gaganprit Gill, Juewen Liu, Heather Gaebler, Ian Hamilton, Scott Smith

Abstract

Rationale DNAzyme-based sensors are a promising technology for possible labile metal monitoring that have not yet been fully tested in real waters. In clean, buffered, laboratory waters specific DNAzymes interact with specific metal ions and produce a signal (e.g., fluorescence). In more complex natural solutions the free ion concentration is reduced by complexation (e.g., to dissolved organic matter, DOM) and the signal would not be proportional to total metal, but hypothetically proportional to the labile fraction of total metal; i.e., the fraction of metal available to interact with the DNA. Methodology Here, an existing metal specific RNA-cleaving DNAzyme for Pb2+ (GR5) is used to test waters representative of natural solutions. Samples were prepared with ionic strengths from 25 to 100 mM using sodium acetate, sodium chloride and sodium bicarbonate. In addition, pH values of 6.5, 7.5 and 8.5 were tested for the different electrolytes, with and without added dissolved organic carbon (DOC), at 2, 5 and 8 mg C/L. Lead additions were performed at toxicologically relevant levels (less than or equal to 1 µM added lead). Results and Discussion The GR5 response was found to be dependent on ionic strength, including identity of the background electrolyte, where high ionic strength slowed the reaction and chloride media increased reaction speed. Reproducible responses of GR5 are possible at conditions similar to natural waters except responses were too fast for high pH (8.5 or higher), low DOC (less than 2 mg C/L) and low ionic strength (25 mM). It is found that GR5 responds to three lead species: PbOH+ , PbCl+ and Pb2+ with relative sensitivities in the same order. GR5 does not respond to lead complexed with acetate, carbonate or dissolved organic matter (DOM). It is possible to use the measured first-order rate constant for lead induced fluorescence of GR5 to calculate ionic lead that agrees within a factor of two with respect to Windermere Humic Aqueous Model (WHAM) predictions. Thus, GR5 may represent a labile lead probe, although further work is necessary to test this.

EN24054  Accepted 06 March 2025

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