Field-based screening identifies resistance to Sunn pest (Eurygaster integriceps) feeding at vegetative stage in elite wheat genotypes
Livinus Emebiri A E , Mustapha El Bousshini B , Mui-Keng Tan C and Francis C. Ogbonnaya B DA Graham Centre for Agricultural Innovation (NSW Department of Primary Industries and Charles Sturt University), Wagga Wagga, NSW 2650, Australia.
B International Center for Agricultural Research in the Dry Areas (ICARDA), PO Box 6299, Rabat Instituts, Morocco.
C NSW Department of Primary Industries, Woodbridge Road, Menangle, NSW 2568, Australia.
D Current address: Grains Research and Development Corporation, PO Box 5367, Kingston, ACT 2604, Australia.
E Corresponding author. Email: Livinus.Emebiri@dpi.nsw.gov.au
Crop and Pasture Science 68(2) 126-133 https://doi.org/10.1071/CP16355
Submitted: 26 September 2016 Accepted: 31 January 2017 Published: 25 February 2017
Abstract
Sunn pest (Eurygaster integriceps Puton) is currently widely distributed in West and Central Asia and Eastern Europe, but has not been found in Australia, Western Europe or North America. Climate warming is known to promote the expansion of its range of distribution, and it is expected that the insect could spread into new territories. Varieties of wheat (Triticum aestivum) carrying resistance remain an important component of managing the biosecurity risk of any potential incursion. Previous studies have identified sources of Sunn pest resistance in wheat, but there is little information on the genes that confer the resistance. This research used field-based, artificial infestation cages to evaluate 204 elite wheat varieties for Sunn pest resistance, at Terbol, Lebanon. A significant (P < 0.001) difference in resistance was observed among the wheat germplasm, with 19 varieties rated as resistant to moderately resistant and 17 as highly susceptible. Three of the elite varieties showed very little damage, a status similar to that of the resistant check, ICBW-209273. In parallel, the research carried out a genome-wide scan with single-nucleotide polymorphism (SNP) markers to identify chromosome regions and putative genes associated with resistance. Association mapping identified SNP markers with significant associations on chromosomes 2D, 4B and 5B. When these markers were projected onto the wheat population sequencing-based (POPSEQ) reference map, they tended to map close to the location of wheat height-reducing genes. The phenotypic variation explained by the identified markers ranged from 7% to 11%, and collectively, they explained 23.9% of the variation or 45% of the generalised heritability. Marker-trait association was confirmed in two independent, doubled-haploid wheat populations, derived from crosses involving wheat landraces from Afghanistan, where Sunn pest is recognised as an endemic problem. In the two wheat populations, the analyses validated the strong association between wsnp_BF483640B_Ta_2_2 and resistance to Sunn pest damage at the vegetative stage. This study demonstrates existence of genetic resistance to Sunn pest feeding at the vegetative stage in elite wheat germplasm. The study also identified and validated SNP markers that could be useful tools for transfer of resistance into new wheat cultivars.
Additional keywords: genome-wide association study (GWAS), genetic resistance, pre-emptive breeding, reduced-height genes (Rht).
References
Addisu M, Snape JW, Simmonds JR, Gooding MJ (2009) Reduced height (Rht) and photoperiod insensitivity (Ppd) allele associations with establishment and early growth of wheat in contrasting production systems. Euphytica 166, 249–267.| Reduced height (Rht) and photoperiod insensitivity (Ppd) allele associations with establishment and early growth of wheat in contrasting production systems.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD1MXhsFOisbc%3D&md5=7be245511243f0fe42d424c922bb5117CAS |
Aljaryian R, Kumar L, Taylor S (2016) Modelling the current and potential future distributions of the sunn pest Eurygaster integriceps (Hemiptera: Scutelleridae) using CLIMEX. Pest Management Science 72, 1989–2000.
| Modelling the current and potential future distributions of the sunn pest Eurygaster integriceps (Hemiptera: Scutelleridae) using CLIMEX.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC28XjsFKrur4%3D&md5=75a0beb9d897b7afe9e467cead2fb557CAS |
Allan RE (1980) Influence of semidwarfism and genetic background on stand establishment of wheat. Crop Science 20, 634–638.
| Influence of semidwarfism and genetic background on stand establishment of wheat.Crossref | GoogleScholarGoogle Scholar |
Amiri A, Bandani AR, Alizadeh H (2016) Molecular identification of cysteine and trypsin protease, effect of different hosts on protease expression, and rnai mediated silencing of cysteine protease gene in the sunn pest. Archives of Insect Biochemistry and Physiology 91, 189–209.
| Molecular identification of cysteine and trypsin protease, effect of different hosts on protease expression, and rnai mediated silencing of cysteine protease gene in the sunn pest.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC2MXhvFWlu7jI&md5=d979c041f2bb02e75c43be3544729110CAS |
Barrett JC, Fry B, Maller J, Daly MJ (2005) Haploview: analysis and visualization of LD and haplotype maps. Bioinformatics 76, 887–893.
Boer M, Cave V, Jansen H, Malosetti M, Mathews K, Murray D, van Eeuwijk F, Welham S (2015) ‘A guide to QTL analysis in Genstat®.’ 18th edn (VSN International: Hemel Hempstead, UK)
Breseghello F, Sorrells ME (2006) Association mapping of kernel size and milling quality in wheat (Triticum aestivum L.) cultivars. Genetics 172, 1165–1177.
| Association mapping of kernel size and milling quality in wheat (Triticum aestivum L.) cultivars.Crossref | GoogleScholarGoogle Scholar |
Canhilal R, Kutuk H, Kanat AD, Islamoglu M, El-Haramein F, El-Bouhssini M (2005) Economic threshold for the Sunn Pest, Eurygaster integriceps Put. (Hemiptera: Scutelleridae), on wheat in South-eastern Turkey. Journal of Agricultural and Urban Entomology 22, 191–201.
Cavanagh CR, Chao S, Wang S, Huang BE, Stephen S, Kiani S, Forrest K, Saintenac C, Brown-Guedira GL, Akhunova A, See D (2013) Genome-wide comparative diversity uncovers multiple targets of selection for improvement in hexaploid wheat landraces and cultivars. Proceedings of the National Academy of Sciences of the United States of America 110, 8057–8062.
| Genome-wide comparative diversity uncovers multiple targets of selection for improvement in hexaploid wheat landraces and cultivars.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3sXhtV2ksL%2FJ&md5=9b4f5d73bb35d1b72badd06354a8ef41CAS |
Chapman JA, Mascher M, Buluç A, Barry K, Georganas E, Session A, Strnadova V, Jenkins J, Sehgal S, Oliker L, Schmutz J (2015) A whole-genome shotgun approach for assembling and anchoring the hexaploid bread wheat genome. Genome Biology 16, 26
| A whole-genome shotgun approach for assembling and anchoring the hexaploid bread wheat genome.Crossref | GoogleScholarGoogle Scholar |
Critchley BR (1998) Literature review of sunn pest Eurygaster integriceps Puton. (Heteroptera:Scutelleridae). Crop Protection 17, 271–287.
| Literature review of sunn pest Eurygaster integriceps Puton. (Heteroptera:Scutelleridae).Crossref | GoogleScholarGoogle Scholar |
Darkoh C, El Bouhssini M, Baum M, Clack B (2010) Characterization of a prolyl endoprotease from Eurygaster integriceps Puton (Sunn Pest) infested wheat. Archives of Insect Biochemistry and Physiology 74, 163–178.
| Characterization of a prolyl endoprotease from Eurygaster integriceps Puton (Sunn Pest) infested wheat.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3cXpsVKnt7g%3D&md5=74136112eef65491768f84e6af4d2bcfCAS |
El Bouhssini M, Nachit M, Valkoun J, Moussa M, Ketata H, Abdallah O, Abdulhai M, Parker BL, Rihawi F, Joubi A, El-Haramein FJ (2007) Evaluation of wheat and its wild relatives for resistance to Sunn pest under artificial infestation. In ‘Sunn pest management: a decade of progress 1994–2004’. (Eds BL Parker, M Skinner, M El-Bouhssini, SG Kumari) pp. 363–368. (Arab Society for Plant Protection: Beirut)
El Bouhssini M, Street K, Joubi A, Ibrahim Z, Rihawi F (2009) Sources of wheat resistance to Sunn pest, Eurygaster integriceps Puton, in Syria. Genetic Resources and Crop Evolution 56, 1065–1069.
| Sources of wheat resistance to Sunn pest, Eurygaster integriceps Puton, in Syria.Crossref | GoogleScholarGoogle Scholar |
El Bouhssini M, Ogbonnaya FC, Chen M, Lhaloui S, Rihawi F, Dabbous A (2013) Sources of resistance in primary synthetic hexaploid wheat (Triticum aestivum L.) to insect pests—Hessian fly, Russian wheat aphid and Sunn pest in the Fertile Crescent. Genetic Resources and Crop Evolution 60, 621–627.
| Sources of resistance in primary synthetic hexaploid wheat (Triticum aestivum L.) to insect pests—Hessian fly, Russian wheat aphid and Sunn pest in the Fertile Crescent.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3sXitFags74%3D&md5=c224792285073adb3d505fe0df80eaa6CAS |
Ellis MH, Rebetzke GJ, Chandler P, Bonnett D, Spielmeyer W, Richards RA (2004) The effect of different height reducing genes on the early growth of wheat. Functional Plant Biology 31, 583–589.
| The effect of different height reducing genes on the early growth of wheat.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD2cXmvVWqt70%3D&md5=f383773fbed79b5aabd87bd284b74030CAS |
Emebiri LC, Tan M-K, El-Bouhssini M, Wildman O, Jighly A, Tadesse W, Ogbonnaya FC (2017) QTL mapping identifies a major locus for resistance in wheat to Sunn pest (Eurygaster integriceps) feeding at the vegetative growth stage. Theoretical and Applied Genetics 130, 309
| QTL mapping identifies a major locus for resistance in wheat to Sunn pest (Eurygaster integriceps) feeding at the vegetative growth stage.Crossref | GoogleScholarGoogle Scholar | 1:STN:280:DC%2BC2srgslOisw%3D%3D&md5=1f7d718913d0c43a4c96fb4656e8d9b0CAS |
Fatehi F, Behamta MR, Zali AA (2009) Gene action for resistance to Sunn pest (Eurygester integriceps Put.) in bread wheat. Asian Journal of Plant Science 8, 82–85.
| Gene action for resistance to Sunn pest (Eurygester integriceps Put.) in bread wheat.Crossref | GoogleScholarGoogle Scholar |
Gul A, Akbay C, Direk M (2006) Sunn pest control policies and effect of Sunn pest damage wheat quality and price in Turkey. Quality & Quantity 40, 469–480.
| Sunn pest control policies and effect of Sunn pest damage wheat quality and price in Turkey.Crossref | GoogleScholarGoogle Scholar |
Hedden P (2003) The genes of the Green Revolution. Trends in Genetics 19, 5–9.
| The genes of the Green Revolution.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD38XpsFaqtL4%3D&md5=a8f219d79786c21011a53d9bbddaa787CAS |
Joukhadar R, El-Bouhssini M, Jighly A, Ogbonnaya FC (2013) Genomic regions associated with resistance to five major pests in wheat. Molecular Breeding 32, 943–960.
| Genomic regions associated with resistance to five major pests in wheat.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3sXhvVWmu7zJ&md5=8a70942a5187723ee96b23ae6795bc61CAS |
Karimzadeh R, Hejazi MJ, Helali H, Iranipour S, Mohammadi SA (2014) Predicting the resting sites of Eurygaster integriceps Put. (Hemiptera: Scutelleridae) using a geographic information system. Precision Agriculture 15, 615–626.
| Predicting the resting sites of Eurygaster integriceps Put. (Hemiptera: Scutelleridae) using a geographic information system.Crossref | GoogleScholarGoogle Scholar |
Kinaci E, Kinaci G, Yildirim AF, Atli A (1998) Sunn pest problems in Central Anatolia and the role of wheat varieties in integrated control. Euphytica 100, 63–67.
| Sunn pest problems in Central Anatolia and the role of wheat varieties in integrated control.Crossref | GoogleScholarGoogle Scholar |
Krupnov VA (2012) Wheat breeding for resistance to the Sunn pest (Eurygaster spp.): Does risk occur? Russian Journal of Genetics: Applied Research 2, 79–84.
| Wheat breeding for resistance to the Sunn pest (Eurygaster spp.): Does risk occur?Crossref | GoogleScholarGoogle Scholar |
Malosetti M, van der Linden CG, Vosman B, van Eeuwijk FA (2007) A mixed model approach to association mapping using pedigree information with an illustration of resistance to Phytophthora infestans in potato. Genetics 175, 879–889.
| A mixed model approach to association mapping using pedigree information with an illustration of resistance to Phytophthora infestans in potato.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD2sXkt1Wgt7k%3D&md5=ac4e12d3e7d5dfd39f2427fce72cd3b0CAS |
Ogbonnaya F, Imtiaz M, Bariana H, McLean M, Shankar M, Hollaway G, Trethowan R, Lagudah E, van Ginkel M (2008) Mining synthetic hexaploids for multiple disease resistance to improve bread wheat. Crop & Pasture Science 59, 421–431.
| Mining synthetic hexaploids for multiple disease resistance to improve bread wheat.Crossref | GoogleScholarGoogle Scholar |
Patterson N, Price AL, Reich D (2006) Population structure and eigenanalysis. PLOS Genetics 2, 2074–2093.
| Population structure and eigenanalysis.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD2sXisVGltw%3D%3D&md5=ad91b7c9948f690bccd77ddbe9e0f5adCAS |
Radjabi GH (1994) Analysis of Sunn pest periodic outbreaks in Iran. Applied Entomology & Phytopathology 61, 1–10.
Rebetzke GJ, Appels R, Morrison AD, Richards RA, McDonald G, Ellis MH, Spielmeyer W, Bonnett DG (2001) Quantitative trait loci on chromosome 4B for coleoptile length and early vigour in wheat (Triticum aestivum L.). Crop & Pasture Science 52, 1221–1234.
| Quantitative trait loci on chromosome 4B for coleoptile length and early vigour in wheat (Triticum aestivum L.).Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD38XltlOnug%3D%3D&md5=da79fe30d6dfb5e93bf6fb7346937accCAS |
Robbins MD, Sim S-C, Yang W, Van Deynze A, van der Knaap E, Joobeur T, Francis DM (2011) Mapping and linkage disequilibrium analysis with a genome-wide collection of SNPs that detect polymorphism in cultivated tomato. Journal of Experimental Botany 62, 1831–1845.
| Mapping and linkage disequilibrium analysis with a genome-wide collection of SNPs that detect polymorphism in cultivated tomato.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3MXjsFyju7o%3D&md5=d0c664bf1153c984264532bfbe57c89dCAS |
Sanaey N, Mirak TN (2012) Wheat resistance to the adult insect of Sunn pest, Eurigaster integriceps Put. American Journal of Agricultural and Biological Sciences 7, 56–60.
| Wheat resistance to the adult insect of Sunn pest, Eurigaster integriceps Put.Crossref | GoogleScholarGoogle Scholar |
Saville RJ, Gosman N, Burt CJ, Makepeace J, Steed A, Corbitt M, Chandler E, Brown JK, Boulton MI, Nicholson P (2012) The ‘Green Revolution’ dwarfing genes play a role in disease resistance in Triticum aestivum and Hordeum vulgare. Journal of Experimental Botany 63, 1271–1283.
| The ‘Green Revolution’ dwarfing genes play a role in disease resistance in Triticum aestivum and Hordeum vulgare.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC38Xit1OlsLw%3D&md5=d8db3bb7c4f5b9be57b5ea510ffb8befCAS |
Shirdelmoghanloo H, Taylor JD, Lohraseb I, Rabie H, Brien C, Timmins A, Martin P, Mather DE, Emebiri L, Collins NC (2016) A QTL on the short arm of wheat (Triticum aestivum L.) chromosome 3B affects the stability of grain weight in plants exposed to a brief heat shock early in grain filling. BMC Plant Biology 16, 100
| A QTL on the short arm of wheat (Triticum aestivum L.) chromosome 3B affects the stability of grain weight in plants exposed to a brief heat shock early in grain filling.Crossref | GoogleScholarGoogle Scholar |
Trethowan R, Mujeeb-Kazi A (2008) Novel germplasm resources for improving environmental stress tolerance of hexaploid wheat. Crop Science 48, 1255–1265.
| Novel germplasm resources for improving environmental stress tolerance of hexaploid wheat.Crossref | GoogleScholarGoogle Scholar |
Ward JH (1963) Hierarchical grouping to optimize an objective function. Journal of the American Statistical Association 58, 236–244.
| Hierarchical grouping to optimize an objective function.Crossref | GoogleScholarGoogle Scholar |
Yu J, Pressoir G, Briggs WH, Bi IV, Yamasaki M, Doebley JF, McMullen MD, Gaut BS, Nielsen DM, Holland JB, Kresovich S (2006) A unified mixed-model method for association mapping that accounts for multiple levels of relatedness. Nature Genetics 38, 203–208.
| A unified mixed-model method for association mapping that accounts for multiple levels of relatedness.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD28XotlGmuw%3D%3D&md5=bdc2c134111bd9b729db1f6df902dcc5CAS |