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Crop and Pasture Science Crop and Pasture Science Society
Plant sciences, sustainable farming systems and food quality
RESEARCH ARTICLE

Coincident quantitative trait loci effects for dormancy, water sensitivity and malting quality traits in the BCD47 × Baronesse barley mapping population

Ariel Julio Castro A E , Andrea Benitez A , Patrick M. Hayes B , Luis Viega C and Les Wright D
+ Author Affiliations
- Author Affiliations

A Departamento de Producción Vegetal, Est. Exp. ‘Dr Mario A. Cassinoni’, Facultad de Agronomía, Universidad de la República, Ruta 3 Km 363, Paysandú 60000, Uruguay.

B Barley Project, Department of Crop and Soil Sciences, Oregon State University, Corvallis, OR 97331, USA.

C Departamento Biología Vegetal, Facultad de Agronomía, Universidad de la República, Garzón 780, Montevideo 12900, Uruguay.

D Busch Agricultural Resources Inc., 3515 Richards Lake Road, Fort Collins, CO 80524, USA.

E Corresponding author. Email: vontruch@fagro.edu.uy

Crop and Pasture Science 61(9) 691-699 https://doi.org/10.1071/CP10085
Submitted: 9 March 2010  Accepted: 15 July 2010   Published: 9 September 2010

Abstract

A degree of seed dormancy (SD) is required for malting barley varieties in Uruguay, and many other parts of the world, in order to prevent pre-harvest sprouting. Water sensitivity (WS) (a decrease in germination under excess water) is a related trait that can create problems at the malthouse. Both traits are affected by environmental conditions during grain filling. We used a population of 100 doubled haploid lines derived from the cross BCD47 × Baronesse to map quantitative trait loci (QTL) affecting SD, WS, and malting quality traits. Preliminary experiments revealed that BCD47 has low SD and Baronesse has high SD. WS for these accessions was not known before this research. A major SD QTL – detected in four experiments – is on chromosome 5H, with BCD47 contributing the low dormancy allele. Four other regions with QTL effects for SD were mapped, but these QTL were significant in data from only one or two environments. Four regions were detected with QTL effects for WS, but only two – in 5H coincident with the SD QTL, and 3H – were significant in more than one environment. SD and WS were affected by the average temperature at the end of the grain-filling period, with higher temperatures associated with lower values for SD. At the same region on 5H where SD and WS QTL were detected, we found significant QTL for malt extract, α-amylase activity, β-glucans, FAN, Kolbach index, wort turbidity and protein content, with BCD47 contributing favourable alleles for all traits. These results underscore the importance of environmental effects on both SD and WS as well as the difficulties of combining good malting quality with adequate levels of SD and WS.

Additional keywords: Hordeum vulgare, malting quality, QTL analysis, seed dormancy, water sensitivity.


Acknowledgments

This research was funded by a competitive grant from the Fondo Clemente Estable (FCE-9025) (MEC-DICYT, Uruguay) and the Mesa Nacional de Entidades de Cebada, Uruguay. The authors thank Silvana Gonzalez, Luis Galante and Justino Baladao for their help in processing the samples from the different experiments.


References


ASBC (2007) ‘Methods of analysis of the American Society of Brewing Chemists.’ (CD-ROM). (American Society of Brewing Chemists: St Paul, MN) Available at: www.asbcnet.org/

Arias G (1991) ‘Calidad industrial de la Cebada Cervecera.’ Serie Técnica 18. (INIA: Montevideo, Uruguay)

Bamforth C , Barclay A (1993) Malting technology and the uses of malt. In ‘Barley: chemistry and technology’. (Eds A McGregor, R Bhatty) pp. 297–354. (American Association of Cereal Chemists: St Paul, MN)

Benech-Arnold RL (2001) Bases of pre-harvest sprouting resistance in barley: physiology, molecular biology and environmental control of dormancy in the barley grain. In ‘Barley science. Recent advances from molecular biology to agronomy of yield and quality’. (Eds GA Slafer, JL Molina-Cano, R Savin, JL Araus, I Romagosa) pp. 481–502. (Food Products Press: New York)

Benech-Arnold RL, Gualano N, Leymarie J, Côme D, Corbineau F (2006) Hypoxia interferes with ABA metabolism and increases ABA sensitivity in embryos of dormant barley grains. Journal of Experimental Botany 57, 1423–1430.
Crossref | GoogleScholarGoogle Scholar | CAS | PubMed | open url image1

Benítez A (1999) Dormancia en semillas de cebada cervecera. Cangüé 16, 25–31. open url image1

Bezant J, Laurie D, Pratchett N, Chojecki J, Kearsey M (1996) Marker regression mapping of QTL controlling flowering time and plant height in a spring barley (Hordeum vulgare L.) cross. Heredity 77, 64–73.
Crossref | GoogleScholarGoogle Scholar | CAS | open url image1

Bonnardeaux Y, Li C, Lance R, Zhang XQ, Sivasithamparam K, Appels R (2008) Seed dormancy in barley: identifying superior genotypes through incorporating epistatic interactions. Australian Journal of Agricultural Research 59, 517–526.
Crossref | GoogleScholarGoogle Scholar | open url image1

Castro A, Hayes PM, Viega L, Vales I (2008) Transgressive segregation for phenological traits in barley explained by two major QTL alleles. Plant Breeding 127, 561–568.
Crossref | GoogleScholarGoogle Scholar | open url image1

Erkkilä MJ, Leah R, Ahogas H, Cameron-Mills V (1998) Allele-dependent barley grain β-amylase activity. Plant Physiology 117, 679–685.
Crossref | GoogleScholarGoogle Scholar | PubMed | open url image1

Gualano NA, Benech-Arnold RL (2009) The effect of water and nitrogen availability during grain filling on the timing of dormancy release in malting barley crops. Euphytica 168, 291–301.
Crossref | GoogleScholarGoogle Scholar | open url image1

Kao C, Zeng Z-B, Teasdale R (1999) Multiple interval mapping for quantitative trait loci. Genetics 152, 1203–1216.
CAS | PubMed |
open url image1

Lapitan NLV, Hess A, Cooper B, Botha A, Badillo D, Iyer H, Menert J, Close T, Wright L, Hanning G, Tahir M, Lawrence C (2009) Differentially expressed genes during malting and correlation with malting quality phenotypes in barley (Hordeum vulgare L.). Theoretical and Applied Genetics 118, 937–952.
Crossref | GoogleScholarGoogle Scholar | CAS | PubMed | open url image1

Li CD, Tarr A, Lance R, Harasymow S, Uhlmann J, Westcot S, Young K, Grime C, Cakir M, Broughton S, Appels R (2003) A major QTL controlling seed dormancy and pre-harvest sprouting/grain α-amylase in two-rowed barley. Australian Journal of Agricultural Research 54, 1303–1313.
Crossref | GoogleScholarGoogle Scholar | CAS | open url image1

Lin R, Horsley RD, Lapitan NLV, Ma Z, Schwarz PB (2009) QTL mapping of dormancy in barley using the Harrington/Morex and Chevron/Stander mapping populations. Crop Science 49, 841–849.
Crossref | GoogleScholarGoogle Scholar | open url image1

Mather D, Tinker NA, LaBerge DE, Edney M, Jones B, Rossnagel B, Legge B, Brigss KG, Irvine RB, Falk DE, Kasha KJ (1997) Regions of the genome that affect grain and malt quality in a North American two-row barley cross. Crop Science 37, 544–554.
Crossref | GoogleScholarGoogle Scholar | CAS | open url image1

Narimanov A , Korystov Y (1998) The mechanism responsible for the increase of barley seed germination rate in the presence of hydrogen peroxide after excessive wetting. Biology Bulletin of the Russian Academy of Sciences 25, 93–96. Abstract taken from Field Crops Abstracts 51, 8899.

Pollock J (1962) Barley and malt. In ‘Barley: Biology biochemistry, technology’. (Ed. AH Cook) pp. 303–399. (Academic Press: London)

Powell W, Thomas WTB, Thompson DM, Swanston JS, Waugh R (1992) Association between rDNA alleles and quantitative traits in doubled haploid populations of barley. Genetics 130, 187–194.
CAS | PubMed |
open url image1

Prada D, Ullrich SE, Molina-Cano JL, Cistué L, Clancy JA, Romagosa I (2004) Genetic control of dormancy in a Triumph/Morex cross in barley. Theoretical and Applied Genetics 109, 62–70.
Crossref | GoogleScholarGoogle Scholar | CAS | PubMed | open url image1

Rodríguez M, Margineda M, González-Martín J, Insausti P, Benech-Arnol R (2001) Predicting preharvest sprouting susceptibility in barley: a model based on temperature during grain filling. Agronomy Journal 93, 1071–1079.
Crossref |
open url image1

Rossi C, Cuesta-Marcos A, Vales I, Gomez-Pando L, Orjeda G, Wise R, Sato K, Hori K, Capettini F, Vivar H, Chen X, Hayes PM (2006) Mapping multiple disease resistance genes using a barley mapping population evaluated in Peru, Mexico, and the USA. Molecular Breeding 18, 355–366.
Crossref | GoogleScholarGoogle Scholar | open url image1

SAS Institute (2004) ‘Statistical analysis system online documentation.’ (SAS Institute: Cary, NC)

Simpson GM (1990) ‘Seed dormancy in grasses.’ (Cambridge University Press: New York)

Strand E (1989) Studies on seed dormancy in small grain species. I. Barley. Norwegian Journal of Agricultural Sciences 3, 85–99. open url image1

Szücks P, Blake VC, Bhat PR, Chao S, Close T, Cuesta-Marcos A, Muehlbauer G, Ramsay L, Waugh R, Hayes PM (2009) An integrated resource for barley linkage map and malting quality QTL alignment. The Plant Genome 2, 134–140.
Crossref | GoogleScholarGoogle Scholar | open url image1

Thomas WTB, Powell W, Swanston J, Ellis R, Chalmers K, Barua U, Jack P, Lea V, Forster B, Waugh R, Smith D (1996) Quantitative trait loci for germination and malting quality characters in a spring barley cross. Crop Science 36, 265–273.
Crossref | GoogleScholarGoogle Scholar | open url image1

Ullrich S , Han F , Blake T , Oberthur L , Dyer W , Clancy J (1995) Seed dormancy in barley: genetic resolution and relationship to other traits. In ‘Seventh International Symposium on Pre-Harvest Sprouting in Cereals’. (Eds K Noda, D Mares) pp. 157–163. (Centre for Academic for Academic Societies: Osaka, Japan)

Ullrich SE, Clancy JA, del Blanco IA, Lee H, Jitkov VA, Han F, Kleinhofs A, Matsui K (2008) Genetic analysis of preharvest sprouting in a six-row barley cross. Molecular Breeding 21, 249–259.
Crossref | GoogleScholarGoogle Scholar | open url image1

Vales MI, Schön C, Capettini F, Chen X, Corey A, Mather D, Mundt C, Richardson K, Sandoval-Islas J, Utz H, Hayes PM (2005) Effect of population size on the estimation of QTL: a test using resistance to barley rust. Theoretical and Applied Genetics 111, 1260–1270.
Crossref | GoogleScholarGoogle Scholar | CAS | PubMed | open url image1

Visser K, Vissers A, Cagirgan M, Kijne J, Wang M (1996) Rapid germination of a barley mutant is correlated with a rapid turnover of abscicic acid outside the embryo. Plant Physiology 111, 1127–1133.
CAS | PubMed |
open url image1

Wang M, Heimovaara-Dijkstra S, Van Duijn B (1995) Modulation of germination of embryos isolated from dormant and nondormant barley grains by manipulation of endogenous abscisic acid. Planta 195, 586–592.
Crossref | GoogleScholarGoogle Scholar | CAS | open url image1

Wang S , Basten C , Zeng Z-B (2005) ‘Windows QTL Cartographer 2.5.’ (North Carolina State University: Raleigh, NC) Available at: www.statgen.ncsu.edu/qtlcart/WQTLCart.htm

Zeng ZB (1994) Precision mapping of quantitative trait loci. Genetics 136, 1457–1468.
CAS | PubMed |
open url image1