Data sharing among protected areas shows advantages in habitat suitability modelling performance
Mattia Falaschi A B D , Stefano Scali B , Roberto Sacchi C and Marco Mangiacotti B CA Department of Environmental Science and Policy, University of Milan, Via Celoria 26, 20133 Milan, Italy.
B Natural History Museum of Milan, Corso Venezia 55, 20121 Milan, Italy.
C Department of Earth and Environmental Sciences, University of Pavia, 27100 Pavia, Italy.
D Corresponding author. Email: matt_fala@hotmail.it
Wildlife Research 48(5) 404-413 https://doi.org/10.1071/WR20196
Submitted: 18 November 2020 Accepted: 28 December 2020 Published: 17 March 2021
Abstract
Context: Most of the effort dedicated to the conservation of biodiversity in the European Union is applied through the establishment and maintenance of the Natura 2000 network, the world’s most extensive network of conservation areas. European Member State must actively manage these sites and report the state of the species listed in the Annexes of the Habitat and Birds Directives. Fulfilling these duties is a challenging task, especially when money available for conservation is limited. Consequently, how to optimise the use of the available economic resources is a primary goal for reserve managers.
Aims: In the present study, we focussed on data-sharing, and we analysed whether data-sharing among institutions may boost the performance of habitat suitability models (HSMs).
Methods: We collected presence data about three species of reptiles in three different protected areas of northern Italy. Then, we built HSMs under the following two different data-sharing policies: data-sharing of species’ occurrence among the different managers of the protected areas, and not sharing the occurrence data among the different managers. To evaluate how sharing the occurrence data influences the reliability of HSMs in various situations, we compared model performances under several sampling-effort levels.
Key results: Results show that data-sharing is usually the best strategy. In most cases, models built under the data-sharing (DS) strategy showed better performance than did data-un-sharing (DU) models. The data-sharing strategy showed advantages in model performance, notably at low levels of sampling effort.
Conclusions: Overcoming administrative barriers and share data among different managers of protected areas allows obtaining more biologically meaningful results.
Implications: Data-sharing among protected areas could allow improving the reliability of future management actions within the Natura 2000 network.
Keywords: common wall lizard, green whip snake, habitat suitability models, Habitats Directive, Natura 2000 network, resource optimisation, western green lizard.
References
Amici, V., Geri, F., Bonini, I., and Rocchini, D. (2014). Ecological niche modelling with herbarium data: a framework to improve Natura 2000 habitat monitoring. Applied Ecology and Environmental Research 12, 645–659.| Ecological niche modelling with herbarium data: a framework to improve Natura 2000 habitat monitoring.Crossref | GoogleScholarGoogle Scholar |
Araújo, M. B., and Peterson, T. A. (2012). Uses and misuses of bioclimatic envelope modeling. Ecology 93, 1527–1539.
| Uses and misuses of bioclimatic envelope modeling.Crossref | GoogleScholarGoogle Scholar | 22919900PubMed |
Araújo, M. B., Alagador, D., Cabeza, M., Nogués-Bravo, D., and Thuiller, W. (2011). Climate change threatens European conservation areas. Ecology Letters 14, 484–492.
| Climate change threatens European conservation areas.Crossref | GoogleScholarGoogle Scholar | 21447141PubMed |
Beck, J., Böller, M., Erhardt, A., and Schwanghart, W. (2014). Spatial bias in the GBIF database and its effect on modeling species’ geographic distributions. Ecological Informatics 19, 10–15.
| Spatial bias in the GBIF database and its effect on modeling species’ geographic distributions.Crossref | GoogleScholarGoogle Scholar |
Blomberg, S., and Shine, R. (2006). Reptiles. In ‘Ecological Census Techniques, a Handbook’, 2nd edn. (Ed. W. J. Sutherland.) pp. 297–307. (Cambridge University Press.)
Bonardi, A., Manenti, R., Corbetta, A., Ferri, V., Fiacchini, D., Giovine, G., Macchi, S., Romanazzi, E., Soccini, C., Bottoni, L., Padoa-Schioppa, E., and Ficetola, G. F. (2011). Usefulness of volunteer data to measure the large scale decline of ‘common’ toad populations. Biological Conservation 144, 2328–2334.
| Usefulness of volunteer data to measure the large scale decline of ‘common’ toad populations.Crossref | GoogleScholarGoogle Scholar |
Bosso, L., Rebelo, H., Garonna, A. P., and Russo, D. (2013). Modelling geographic distribution and detecting conservation gaps in Italy for the threatened beetle Rosalia alpina. Journal for Nature Conservation 21, 72–80.
| Modelling geographic distribution and detecting conservation gaps in Italy for the threatened beetle Rosalia alpina.Crossref | GoogleScholarGoogle Scholar |
Buse, J., Schröder, B., and Assmann, T. (2007). Modelling habitat and spatial distribution of an endangered longhorn beetle: a case study for saproxylic insect conservation. Biological Conservation 137, 372–381.
| Modelling habitat and spatial distribution of an endangered longhorn beetle: a case study for saproxylic insect conservation.Crossref | GoogleScholarGoogle Scholar |
Elith, J., Phillips, S. J., Hastie, T., Dudík, M., Chee, Y. E., and Yates, C. J. (2011). A statistical explanation of MaxEnt for ecologists. Diversity & Distributions 17, 43–57.
| A statistical explanation of MaxEnt for ecologists.Crossref | GoogleScholarGoogle Scholar |
Embling, C. B., Gillibrand, P. A., Gordon, J., Shrimpton, J., Stevick, P. T., and Hammond, P. S. (2010). Using habitat models to identify suitable sites for marine protected areas for harbour porpoises (Phocoena phocoena). Biological Conservation 143, 267–279.
| Using habitat models to identify suitable sites for marine protected areas for harbour porpoises (Phocoena phocoena).Crossref | GoogleScholarGoogle Scholar |
Epstein, Y., López-Bao, J. V., and Chapron, G. (2016). A legal–ecological understanding of favorable conservation status for species in Europe. Conservation Letters 9, 81–88.
| A legal–ecological understanding of favorable conservation status for species in Europe.Crossref | GoogleScholarGoogle Scholar |
European Environment Agency (2017). Natura 2000 Barometer. Available at https://www.eea.europa.eu/data-and-maps/dashboards/natura-2000-barometer [verified 8 October 2018].
Evans, D. (2006). The habitats of the European Union Habitats Directive. Biology and Environment 106B, 167–173.
| The habitats of the European Union Habitats Directive.Crossref | GoogleScholarGoogle Scholar |
Falaschi, M., Mangiacotti, M., Sacchi, R., Scali, S., and Razzetti, E. (2018). Electric circuit theory applied to alien invasions: a connectivity model predicting the Balkan frog expansion in northern Italy. Acta Herpetologica 13, 33–42.
| Electric circuit theory applied to alien invasions: a connectivity model predicting the Balkan frog expansion in northern Italy.Crossref | GoogleScholarGoogle Scholar |
Falaschi, M., Manenti, R., Thuiller, W., and Ficetola, G. F. (2019). Continental-scale determinants of population trends in European amphibians and reptiles. Global Change Biology 25, 3504–3515.
| Continental-scale determinants of population trends in European amphibians and reptiles.Crossref | GoogleScholarGoogle Scholar | 31220393PubMed |
Ficetola, G. F., Bonardi, A., Sindaco, R., and Padoa-Schioppa, E. (2013). Estimating patterns of reptile biodiversity in remote regions. Journal of Biogeography 40, 1202–1211.
| Estimating patterns of reptile biodiversity in remote regions.Crossref | GoogleScholarGoogle Scholar |
Ficetola, G. F., Fanell, M., Garizio, L., Falaschi, M., Tenan, S., Ghielmi, S., Laddaga, L., Menegon, M., and Delfino, M. (2020). Estimating abundance and habitat suitability in a micro-endemic snake: the Walser viper. Acta Herpetologica 15, 73–85.
| Estimating abundance and habitat suitability in a micro-endemic snake: the Walser viper.Crossref | GoogleScholarGoogle Scholar |
Fielding, A. H., and Bell, J. F. (1997). A review of methods for the assessment of prediction errors in conservation presence/absence models. Environmental Conservation 24, 38–49.
| A review of methods for the assessment of prediction errors in conservation presence/absence models.Crossref | GoogleScholarGoogle Scholar |
Fouquet, A., Ficetola, G. F., Haigh, A., and Gemmell, N. (2010). Using ecological niche modelling to infer past, present and future environmental suitability for Leiopelma hochstetteri, an endangered New Zealand native frog. Biological Conservation 143, 1375–1384.
| Using ecological niche modelling to infer past, present and future environmental suitability for Leiopelma hochstetteri, an endangered New Zealand native frog.Crossref | GoogleScholarGoogle Scholar |
Funk, A., Gschöpf, C., Blaschke, A. P., Weigelhofer, G., and Reckendorfer, W. (2013). Ecological niche models for the evaluation of management options in an urban floodplain: conservation vs. restoration purposes. Environmental Science & Policy 34, 79–91.
| Ecological niche models for the evaluation of management options in an urban floodplain: conservation vs. restoration purposes.Crossref | GoogleScholarGoogle Scholar |
Guillera-Arroita, G., Lahoz-Monfort, J. J., Elith, J., Gordon, A., Kujala, H., Lentini, P. E., McCarthy, M. A., Tingley, R., and Wintle, B. A. (2015). Is my species distribution model fit for purpose? Matching data and models to applications. Global Ecology and Biogeography 24, 276–292.
| Is my species distribution model fit for purpose? Matching data and models to applications.Crossref | GoogleScholarGoogle Scholar |
Hanson, J. O., Rhodes, J. R., Butchart, S. H. M., Buchanan, G. M., Rondinini, C., Ficetola, G. F., and Fuller, R. A. (2020). Global conservation of species’ niches. Nature 580, 232–234.
| Global conservation of species’ niches.Crossref | GoogleScholarGoogle Scholar | 32269340PubMed |
Hastie, T., and Tibshirani, R. (1986). Generalized additive models. Statistical Science 1, 297–310.
| Generalized additive models.Crossref | GoogleScholarGoogle Scholar |
Hijmans, R. J. (2012). Cross-validation of species distribution models: removing spatial sorting bias and calibration with a null model. Ecology 93, 679–688.
| Cross-validation of species distribution models: removing spatial sorting bias and calibration with a null model.Crossref | GoogleScholarGoogle Scholar | 22624221PubMed |
Hijmans, R. J. (2019). raster: geographic data analysis and modeling. R package version 2.9-5. Available at https://cran.r-project.org/package=raster.
Hijmans, R. J., Phillips, S., Leathwick, J., and Elith, J. (2015). dismo: Species Distribution Modeling. R package version 1.1–1. Available at http://cran.r-project.org/web/packages/dismo/index.html.
Hill, R., Davies, J., Bohnet, I. C., Robinson, C. J., Maclean, K., and Pert, P. L. (2015). Collaboration mobilises institutions with scale-dependent comparative advantage in landscape-scale biodiversity conservation. Environmental Science & Policy 51, 267–277.
| Collaboration mobilises institutions with scale-dependent comparative advantage in landscape-scale biodiversity conservation.Crossref | GoogleScholarGoogle Scholar |
Ihlow, F., Bonke, R., Hartmann, T., Geissler, P., Behler, N., and Rödder, D. (2015). Habitat suitability, coverage by protected areas and population connectivity for the Siamese crocodile Crocodylus siamensis Schneider, 1801. Aquatic Conservation 25, 544–554.
| Habitat suitability, coverage by protected areas and population connectivity for the Siamese crocodile Crocodylus siamensis Schneider, 1801.Crossref | GoogleScholarGoogle Scholar |
Jiménez-Valverde, A. (2012). Insights into the area under the receiver operating characteristic curve (AUC) as a discrimination measure in species distribution modelling. Global Ecology and Biogeography 21, 498–507.
| Insights into the area under the receiver operating characteristic curve (AUC) as a discrimination measure in species distribution modelling.Crossref | GoogleScholarGoogle Scholar |
Johovic, I., Gama, M., Banha, F., Tricarico, E., and Anastácio, P. M. (2020). A potential threat to amphibians in the European Natura 2000 network: forecasting the distribution of the American bullfrog Lithobates catesbeianus. Biological Conservation 245, 108551.
| A potential threat to amphibians in the European Natura 2000 network: forecasting the distribution of the American bullfrog Lithobates catesbeianus.Crossref | GoogleScholarGoogle Scholar |
Kuznetsova, A., Brockhoff, P. B., and Christensen, R. H. B. (2017). lmerTest package: tests in linear mixed effects models. Journal of Statistical Software 82, .
| lmerTest package: tests in linear mixed effects models.Crossref | GoogleScholarGoogle Scholar |
Lejano, R. P., and Ingram, H. (2009). Collaborative networks and new ways of knowing. Environmental Science & Policy 12, 653–662.
| Collaborative networks and new ways of knowing.Crossref | GoogleScholarGoogle Scholar |
Maiorano, L., Falcucci, A., Garton, E. O., and Boitani, L. (2007). Contribution of the Natura 2000 network to biodiversity conservation in Italy. Conservation Biology 21, 1433–1444.
| Contribution of the Natura 2000 network to biodiversity conservation in Italy.Crossref | GoogleScholarGoogle Scholar | 18173467PubMed |
Mangiacotti, M., Scali, S., Sacchi, R., Bassu, L., Nulchis, V., and Corti, C. (2013). Assessing the spatial scale effect of anthropogenic factors on species distribution. PLoS One 8, e67573.
| Assessing the spatial scale effect of anthropogenic factors on species distribution.Crossref | GoogleScholarGoogle Scholar | 23825669PubMed |
Marta, S., Lacasella, F., Romano, A., and Ficetola, G. F. (2019). Cost-effective spatial sampling designs for field surveys of species distribution. Biodiversity and Conservation 28, 2891–2908.
| Cost-effective spatial sampling designs for field surveys of species distribution.Crossref | GoogleScholarGoogle Scholar |
McPherson, T. Y. (2014). Landscape scale species distribution modeling across the Guiana Shield to inform conservation decision making in Guyana. Biodiversity and Conservation 23, 1931–1948.
| Landscape scale species distribution modeling across the Guiana Shield to inform conservation decision making in Guyana.Crossref | GoogleScholarGoogle Scholar |
Mikkonen, N., and Moilanen, A. (2013). Identification of top priority areas and management landscapes from a national Natura 2000 network. Environmental Science & Policy 27, 11–20.
| Identification of top priority areas and management landscapes from a national Natura 2000 network.Crossref | GoogleScholarGoogle Scholar |
Mori, E., Ficetola, G. F., Bartolomei, R., Capobianco, G., Varuzza, P., and Falaschi, M. (2021). How the South was won: current and potential range expansion of the crested porcupine in southern Italy. Mammalian Biology 101, 11–19.
| How the South was won: current and potential range expansion of the crested porcupine in southern Italy.Crossref | GoogleScholarGoogle Scholar |
Peterman, W. E., Crawford, J. A., and Kuhns, A. R. (2013). Using species distribution and occupancy modeling to guide survey efforts and assess species status. Journal for Nature Conservation 21, 114–121.
| Using species distribution and occupancy modeling to guide survey efforts and assess species status.Crossref | GoogleScholarGoogle Scholar |
Phillips, S. J., Dudík, M., and Schapire, R. E. (2004). A maximum entropy approach to species distribution modeling. In ‘Proceeding of the Twenty-First International Conference on Machine Learning’. pp. 655–662. (Association for Computing Machinery: New York, NY, USA.)
Phillips, S. J., Anderson, R. P., and Schapire, R. E. (2006). Maximum entropy modeling of species geographic distributions. Ecological Modelling 190, 231–259.
| Maximum entropy modeling of species geographic distributions.Crossref | GoogleScholarGoogle Scholar |
R Core Team (2018). R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. Available at https://www.r-project.org/.
Raes, N., and ter Steege, H. (2007). A null-model for significance testing of presence-only species distribution models. Ecography 30, 727–736.
| A null-model for significance testing of presence-only species distribution models.Crossref | GoogleScholarGoogle Scholar |
Ramellini, S., Simoncini, A., Ficetola, G. F., and Falaschi, M. (2019). Modelling the potential spread of the red-billed leiothrix Leiothrix lutea in Italy. Bird Study 66, 550–560.
| Modelling the potential spread of the red-billed leiothrix Leiothrix lutea in Italy.Crossref | GoogleScholarGoogle Scholar |
Rondinini, C., di Marco, M., Chiozza, F., Santulli, G., Baisero, D., Visconti, P., Hoffmann, M., Schipper, J., Stuart, S. N., Tognelli, M. F., Amori, G., Falcucci, A., Maiorano, L., and Boitani, L. (2011). Global habitat suitability models of terrestrial mammals. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences 366, 2633–2641.
| Global habitat suitability models of terrestrial mammals.Crossref | GoogleScholarGoogle Scholar | 21844042PubMed |
Rubio-Salcedo, M., Martínez, I., Carreño, F., and Escudero, A. (2013). Poor effectiveness of the Natura 2000 network protecting Mediterranean lichen species. Journal for Nature Conservation 21, 1–9.
| Poor effectiveness of the Natura 2000 network protecting Mediterranean lichen species.Crossref | GoogleScholarGoogle Scholar |
Sillero, N. (2011). What does ecological modelling model? A proposed classification of ecological niche models based on their underlying methods. Ecological Modelling 222, 1343–1346.
| What does ecological modelling model? A proposed classification of ecological niche models based on their underlying methods.Crossref | GoogleScholarGoogle Scholar |
Strange, N., Jacobsen, J. B., Thorsen, B. J., and Tarp, P. (2007). Value for money: protecting endangered species on Danish heathland. Environmental Management 40, 761–774.
| Value for money: protecting endangered species on Danish heathland.Crossref | GoogleScholarGoogle Scholar | 17906890PubMed |
Susskind, L., Camacho, A. E., and Schenk, T. (2012). A critical assessment of collaborative adaptive management in practice. Journal of Applied Ecology 49, 47–51.
| A critical assessment of collaborative adaptive management in practice.Crossref | GoogleScholarGoogle Scholar |
Thuiller, W., Lavergne, S., Roquet, C., Boulangeat, I., Lafourcade, B., and Araujo, M. B. (2011). Consequences of climate change on the tree of life in Europe. Nature 470, 531–534.
| Consequences of climate change on the tree of life in Europe.Crossref | GoogleScholarGoogle Scholar | 21326204PubMed |
Warren, D. L., and Seifert, S. N. (2011). Ecological niche modeling in Maxent: the importance of model complexity and the performance of model selection criteria. Ecological Applications 21, 335–342.
| Ecological niche modeling in Maxent: the importance of model complexity and the performance of model selection criteria.Crossref | GoogleScholarGoogle Scholar | 21563566PubMed |
Wood, S. N. (2011). Fast stable restricted maximum likelihood and marginal likelihood estimation of semiparametric generalized linear models. Journal of the Royal Statistical Society. Series B, Statistical Methodology 73, 3–36.
| Fast stable restricted maximum likelihood and marginal likelihood estimation of semiparametric generalized linear models.Crossref | GoogleScholarGoogle Scholar |
Wyborn, C., and Bixler, R. P. (2013). Collaboration and nested environmental governance: scale dependency, scale framing, and cross-scale interactions in collaborative conservation. Journal of Environmental Management 123, 58–67.
| Collaboration and nested environmental governance: scale dependency, scale framing, and cross-scale interactions in collaborative conservation.Crossref | GoogleScholarGoogle Scholar | 23583866PubMed |