Free Standard AU & NZ Shipping For All Book Orders Over $80!
Register      Login
Soil Research Soil Research Society
Soil, land care and environmental research
RESEARCH ARTICLE

Fluxes of greenhouse gases from incubated soils using different lid-closure times

Dang Duy Minh A B C D , Ben Macdonald A , Sören Warneke A and Ian White B
+ Author Affiliations
- Author Affiliations

A Commonwealth Scientific and Industrial Research Organisation (CSIRO) Agriculture Flagship, Canberra, ACT 2601, Australia.

B Fenner School of Environment and Society, Australian National University, Canberra, ACT 2601, Australia.

C Soil Science Department, College of Agriculture and Applied Biology, Can Tho University, Can Tho, Vietnam.

D Corresponding author. Email: ddminh@ctu.edu.vn

Soil Research 56(1) 39-48 https://doi.org/10.1071/SR17050
Submitted: 3 February 2017  Accepted: 24 June 2017   Published: 12 September 2017

Additional keywords: amendment, greenhouse gas emissions, incubation, nitrogen cycle, soil activation.


References

Azam F, Müller C, Weiske A, Benckiser G, Ottow J (2002) Nitrification and denitrification as sources of atmospheric nitrous oxide – role of oxidizable carbon and applied nitrogen. Biology and Fertility of Soils 35, 54–61.
Nitrification and denitrification as sources of atmospheric nitrous oxide – role of oxidizable carbon and applied nitrogen.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD38XivVGrsbw%3D&md5=9d2e6c91e548c62f24297845257bbcfeCAS |

Bandibas J, Vermoesen A, De Groot CJ, Cleemput OV (1994) The effect of different moisture regimes and soil characteristics on nitrous oxide emission and consumption by different soils. Soil Science 158, 106–114.
The effect of different moisture regimes and soil characteristics on nitrous oxide emission and consumption by different soils.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaK2MXivFGntL0%3D&md5=076e60b64fdb19c8c90b81ac96ff2c70CAS |

Beauchamp EG, Myrold DD, Reynolds WD, Drury CF (2007) Denitrification techniques for soils. In ‘Soil sampling and methods of analysis’. Second edn. (Eds MR Carter, EG Gregorich) pp. 471-493. (CRC Press: Boca Raton, FL)

Beauchamp EG, Trevors JT, Paul JW (1989) Carbon sources for bacterial denitrification. In ‘Advances in soil science’. (Ed. BA Stewart) pp. 113–142. (Springer New York: New York, NY)

Bloem J, Schouten AJ, Sørensen SJ, Rutgers M, Werf A van der, Breure AM (2006) Monitoring and evaluating soil quality. In ‘Microbiological methods for assessing soil quality’. (Eds J Bloem, DW Hopkins, A Benedetti) pp. 23–49. (CABI: Wallingford, UK)

Chantigny MH (2003) Dissolved and water-extractable organic matter in soils: a review on the influence of land use and management practices. Geoderma 113, 357–380.
Dissolved and water-extractable organic matter in soils: a review on the influence of land use and management practices.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD3sXhsF2nsbw%3D&md5=564ff062aeb30be3d88fc4c960dc1574CAS |

Cheng Y, Zhang J-B, Wang J, Cai Z-C, Wang S-Q (2015) Soil pH is a good predictor of the dominating N2O production processes under aerobic conditions. Journal of Plant Nutrition and Soil Science 178, 370–373.
Soil pH is a good predictor of the dominating N2O production processes under aerobic conditions.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC2MXmtVartLc%3D&md5=bbb37e9fbb52d89ae21d5309912cb2a5CAS |

Collier SM, Ruark MD, Oates LG, Jokela WE, Dell CJ (2014) Measurement of greenhouse gas flux from agricultural soils using static chambers. Journal of Visualized Experiments 90, e52110
Measurement of greenhouse gas flux from agricultural soils using static chambers.Crossref | GoogleScholarGoogle Scholar |

Creamer RE, Schulte RPO, Stone, D., Gal, A., Krogh, P. H., Lo Papa, G., Murray, P. J., Pérès, G., Foerster, B., Rutgers, M., Sousa, J. P., Winding, A (2014) Measuring basal soil respiration across Europe: Do incubation temperature and incubation period matter? Ecological Indicators 36, 409–418.
Measuring basal soil respiration across Europe: Do incubation temperature and incubation period matter?Crossref | GoogleScholarGoogle Scholar |

Dang DM, Macdonald B, Warneke S, White I (2017) Available carbon and nitrate increase greenhouse gas emissions from soils affected by salinity. Soil Research 55, 47–57.
Available carbon and nitrate increase greenhouse gas emissions from soils affected by salinity.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC2sXhsFaq&md5=34f8ebd25f4765a578ba73b08a2c099eCAS |

Davidson EA, Keller M, Erickson HE, Verchot LV, Veldkamp E (2000) Testing a conceptual model of soil emissions of nitrous and nitric oxides: Using two functions based on soil nitrogen availability and soil water content, the hole-in-the-pipe model characterizes a large fraction of the observed variation of nitric oxide and nitrous oxide emissions from soils. Bioscience 50, 667–680.
Testing a conceptual model of soil emissions of nitrous and nitric oxides: Using two functions based on soil nitrogen availability and soil water content, the hole-in-the-pipe model characterizes a large fraction of the observed variation of nitric oxide and nitrous oxide emissions from soils.Crossref | GoogleScholarGoogle Scholar |

Davidson EA, Nepstad DC, Ishida FY, Brando PM (2008) Effects of an experimental drought and recovery on soil emissions of carbon dioxide, methane, nitrous oxide, and nitric oxide in a moist tropical forest. Global Change Biology 14, 2582–2590.

Denmead OT, Harper LA, Freney JR, Griffith DWT, Leuning R, Sharpe RR (1998) A mass balance method for non-intrusive measurements of surface-air trace gas exchange. Atmospheric Environment 32, 3679–3688.
A mass balance method for non-intrusive measurements of surface-air trace gas exchange.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaK1cXmtFCrtLw%3D&md5=a9b74c8bdd308bf8b68379cb72203be9CAS |

Dobbie K, Smith K (2001) The effects of temperature, water‐filled pore space and land use on N2O emissions from an imperfectly drained gleysol. European Journal of Soil Science 52, 667–673.
The effects of temperature, water‐filled pore space and land use on N2O emissions from an imperfectly drained gleysol.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD38XltVKqtA%3D%3D&md5=031db225c7f72a66e696e75cf94cf893CAS |

Gao X, Rajendran N, Tenuta M, Dunmola A, Burton DL (2014) Greenhouse gas accumulation in the soil profile is not always related to surface emissions in a prairie pothole agricultural landscape. Soil Science Society of America Journal 78, 805–817.
Greenhouse gas accumulation in the soil profile is not always related to surface emissions in a prairie pothole agricultural landscape.Crossref | GoogleScholarGoogle Scholar |

Healy RW, Striegl RG, Russell TF, Hutchinson GL, Livingston GP (1996) Numerical evaluation of static-chamber measurements of soil—atmosphere gas exchange: Identification of physical processes. Soil Science Society of America Journal 60, 740–747.
Numerical evaluation of static-chamber measurements of soil—atmosphere gas exchange: Identification of physical processes.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaK28XjtFanu78%3D&md5=a5c21526446de80a2739b6695427a707CAS |

Holland EA, Robertson GP, Greenberg J, Groffman PM, Boone RD, Gosz JR (1999) Soil CO2, N2O, and CH4 exchange. In ‘Standard soil methods for long-term ecological research’. (Eds GP Robertson, DC Coleman, CS Bledsoe, P Sollins) pp. 185-201. (Oxford University Press: New York)

Inselsbacher E, Wanek W, Ripka K, Hackl E, Sessitsch A, Strauss J, Zechmeister-Boltenstern S (2011) Greenhouse gas fluxes respond to different N fertilizer types due to altered plant-soil-microbe interactions. Plant and Soil 343, 17–35.
Greenhouse gas fluxes respond to different N fertilizer types due to altered plant-soil-microbe interactions.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3MXmtFSks74%3D&md5=d90a71e72add17a059df4a7f6d460135CAS |

Iovieno P, Bååth E (2008) Effect of drying and rewetting on bacterial growth rates in soil. FEMS Microbiology Ecology 65, 400–407.
Effect of drying and rewetting on bacterial growth rates in soil.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD1cXhtVGrur3M&md5=ef97973859f484bcdad74311a043a5adCAS |

Isbell R (2002) ‘The Australian soil classification’, Revised 1st edn. (CSIRO Publishing: Melbourne)

Janssens IA, Lankreijer H, et al (2001) Productivity overshadows temperature in determining soil and ecosystem respiration across European forests. Global Change Biology 7, 269–278.
Productivity overshadows temperature in determining soil and ecosystem respiration across European forests.Crossref | GoogleScholarGoogle Scholar |

Keeney DR, Nelson DW (1982) Nitrogen—Inorganic forms. In ‘Methods of soil analysis. Part 2. Chemical and microbiological properties’. (Ed. AL Page) pp. 643–698. (American Society of Agronomy, Soil Science Society of America: Madison, WI)

Khalil K, Mary B, Renault P (2004) Nitrous oxide production by nitrification and denitrification in soil aggregates as affected by O2 concentration. Soil Biology & Biochemistry 36, 687–699.
Nitrous oxide production by nitrification and denitrification in soil aggregates as affected by O2 concentration.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD2cXisFOntrc%3D&md5=ab2114dcb7d7cd958d01a7148f3e3129CAS |

Kirschbaum MUF (2006) The temperature dependence of organic-matter decomposition-still a topic of debate. Soil Biology & Biochemistry 38, 2510–2518.
The temperature dependence of organic-matter decomposition-still a topic of debate.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD28XotFKjt78%3D&md5=f266431f9c272d45f41647762ca40c01CAS |

Lang M, Cai Z, Chang SX (2011) Effects of land use type and incubation temperature on greenhouse gas emissions from Chinese and Canadian soils. Journal of Soils and Sediments 11, 15–24.
Effects of land use type and incubation temperature on greenhouse gas emissions from Chinese and Canadian soils.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3cXhs1ajtLfM&md5=d1c1a0f979fe9e925dc9cd38800f455eCAS |

Lawrie RA, Eldridge SM (2004) The response of some New South Wales coastal floodplain soils to irrigation of high strength organic wastewaters. In ‘SuperSoil 2004: 3rd Australian New Zealand Soils Conference’, 5–9 December 2004, University of Sydney, Australia.

Le Mer J, Roger P (2001) Production, oxidation, emission and consumption of methane by soils: A review. European Journal of Soil Biology 37, 25–50.
Production, oxidation, emission and consumption of methane by soils: A review.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD3MXjvFOnsbs%3D&md5=bb6aa5f0809286d5d262237e44027500CAS |

Lou Y, Ren L, Li Z, Zhang T, Inubushi K (2007) Effect of rice residues on carbon dioxide and nitrous oxide emissions from a paddy soil of subtropical china. Water, Air, and Soil Pollution 178, 157–168.
Effect of rice residues on carbon dioxide and nitrous oxide emissions from a paddy soil of subtropical china.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD2sXkvFWqug%3D%3D&md5=143d4f07443ce9525113c8227e26d078CAS |

Luo J, White R, Roger Ball P, Tillman R (1996) Measuring denitrification activity in soils under pasture: optimizing conditions for the short-term denitrification enzyme assay and effects of soil storage on denitrification activity. Soil Biology & Biochemistry 28, 409–417.
Measuring denitrification activity in soils under pasture: optimizing conditions for the short-term denitrification enzyme assay and effects of soil storage on denitrification activity.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaK28XhsFaqt7Y%3D&md5=a82b4feaef034051ca09f757cc730da6CAS |

Mondini C, Cayuela ML, Sanchez-Monedero MA, Roig A, Brookes PC (2006) Soil microbial biomass activation by trace amounts of readily available substrate. Biology and Fertility of Soils 42, 542–549.
Soil microbial biomass activation by trace amounts of readily available substrate.Crossref | GoogleScholarGoogle Scholar |

Nakano T, Sawamoto T, Morishita T, Inoue G, Hatano R (2004) A comparison of regression methods for estimating soil–atmosphere diffusion gas fluxes by a closed-chamber technique. Soil Biology & Biochemistry 36, 107–113.
A comparison of regression methods for estimating soil–atmosphere diffusion gas fluxes by a closed-chamber technique.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD2cXjtVajsA%3D%3D&md5=737683cdf6a309af23f2851259a08466CAS |

Nelson DW, Sommers LE (1996) Total carbon, organic carbon, and organic matter. In ‘Methods of soil analysis, part 3—chemical methods’. (Ed. DL Sparks) pp. 961–1011. (Soil Science Society of America, American Society of Agronomy: Madison, WI)

Nguyen DH, Biala J, Grace PR, Scheer C, Rowlings DW (2014a) Greenhouse gas emissions from sub-tropical agricultural soils after addition of organic by-products. SpringerPlus 3, 491–504.
Greenhouse gas emissions from sub-tropical agricultural soils after addition of organic by-products.Crossref | GoogleScholarGoogle Scholar |

Nguyen DH, Grace PR, Scheer C, Rowlings D (2014b) Determining gas sampling timelines for estimating emissions in small chamber incubation experiments. IOSR Journal of Engineering (IOSRJEN) 4, 14–16.
Determining gas sampling timelines for estimating emissions in small chamber incubation experiments.Crossref | GoogleScholarGoogle Scholar |

Parkin TB, Venterea RT (2010) Chamber-based trace gas flux measurements [Chapter 3]. In ‘Sampling protocols.’ (Ed. RF Follett) pp. 3–1 to 3–39. (U.S. Department of Agriculture, Agricultural Research Service).

Petersen SO, Regina K, et al (2006) Nitrous oxide emissions from organic and conventional crop rotations in five European countries. Agriculture, Ecosystems & Environment 112, 200–206.
Nitrous oxide emissions from organic and conventional crop rotations in five European countries.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD28Xktl2ltQ%3D%3D&md5=2433a724f5d447b584f1336ce5c4608fCAS |

Phillips RL, Tanaka DL, Archer DW, Hanson JD (2009) Fertilizer application timing influences greenhouse gas fluxes over a growing season. Journal of Environmental Quality 38, 1569–1579.
Fertilizer application timing influences greenhouse gas fluxes over a growing season.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD1MXosFKqsbo%3D&md5=3f0bba81c1b5efbb6c2ce22e5b81c37dCAS |

Pilegaard K, Skiba U, et al (2006) Factors controlling regional differences in forest soil emission of nitrogen oxides (NO and N2O). Biogeosciences 3, 651–661.
Factors controlling regional differences in forest soil emission of nitrogen oxides (NO and N2O).Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD2sXivF2htrc%3D&md5=b5a30f86de90b0affd907a06f1435632CAS |

Rayment GE, Lyons DJ (2011) ‘Soil chemical methods: Australasia’. (CSIRO Publishing: Collingwood VIC, Australia)

Ringrose-Voase AJ, Nadelko AJ (2013) Deep drainage in a Grey Vertosol under furrow-irrigated cotton. Crop & Pasture Science 64, 1155–1170.

Rustad LE, Huntington TG, Boone RD (2000) Controls on soil respiration: Implications for climate change. Biogeochemistry 48, 1–6.
Controls on soil respiration: Implications for climate change.Crossref | GoogleScholarGoogle Scholar |

Rutherford PM, McGill WB, Arocena JM, Figueiredo CT (2007) Total nitrogen. In ‘Soil Sampling and methods of analysis’, Second edn. (Eds MR Carter, EG Gregorich) pp 239-263. (CRC Press: Boca Raton, FL)

Sahrawat K (1980) Nitrogen mineralization in acid sulfate soils. Plant and Soil 57, 143–146.
Nitrogen mineralization in acid sulfate soils.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaL3MXks1SltA%3D%3D&md5=c8ecb997907bc3f502ef21a9f382701bCAS |

Savage K, Phillips R, Davidson E (2014) High temporal frequency measurements of greenhouse gas emissions from soils. Biogeosciences 11, 2709–2720.
High temporal frequency measurements of greenhouse gas emissions from soils.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC2cXhs1Sju7rN&md5=257c66144b8f8aafdb023ce7eaac7cc8CAS |

Schaufler G, Kitzler B, Schindlbacher A, Skiba U, Sutton MA, Zechmeister-Boltenstern S (2010) Greenhouse gas emissions from European soils under different land use: effects of soil moisture and temperature. European Journal of Soil Science 61, 683–696.
Greenhouse gas emissions from European soils under different land use: effects of soil moisture and temperature.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3cXhtlCrurzK&md5=c596bcc0db7744b28189fb2e37b46e29CAS |

Singh BP, Hatton BJ, Singh B, Cowie AL, Kathuria A (2010) Influence of biochars on nitrous oxide emission and nitrogen leaching from two contrasting soils. Journal of Environmental Quality 39, 1224–1235.
Influence of biochars on nitrous oxide emission and nitrogen leaching from two contrasting soils.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3cXoslCqtLs%3D&md5=ed832c94de23a5b07e6266bd9c041b91CAS |

Smith CJ, Bond WJ (1999) Losses of nitrogen from an effluent-irrigated plantation. Soil Research 37, 371–390.
Losses of nitrogen from an effluent-irrigated plantation.Crossref | GoogleScholarGoogle Scholar |

Smith CJ, Snow VO, Leuning R, Hsu D (2001) Nitrogen balance of effluent irrigated silage cropping systems in Southern Australia. TheScientificWorld 1(S2), 35–41. 10.1100/tsw.2001

Smith KA, Ball T, Conen F, Dobbie KE, Massheder J, Rey A (2003) Exchange of greenhouse gases between soil and atmosphere: interactions of soil physical factors and biological processes. European Journal of Soil Science 54, 779–791.
Exchange of greenhouse gases between soil and atmosphere: interactions of soil physical factors and biological processes.Crossref | GoogleScholarGoogle Scholar |

Smith KA, Clayton H, et al (1994) Micrometeorological and chamber methods for measurement of nitrous-oxide fluxes between soils and the atmosphere - overview and conclusions. Journal of Geophysical Research, D, Atmospheres 99, 16541–16548.
Micrometeorological and chamber methods for measurement of nitrous-oxide fluxes between soils and the atmosphere - overview and conclusions.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaK2cXmvVeqtro%3D&md5=d2381229ddc0451bb9c493117e3b3f8cCAS |

Smith P, Martino D, et al. (2007) Agriculture. In ‘Climate Change 2007: Mitigation. Contribution of Working Group III to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change’. (Eds B Metz, OR Davidson, PR Bosch, R Dave, LA Meyer) pp 497-540. (Cambridge University Press, Cambridge, UK and New York, USA)

Soil Survey Staff (1996) ‘Keys to soil taxonomy’, 7th edn. (Natural Resources Conservation Service of USDA: Washington DC)

Tenuta M, Sparling B (2011) A laboratory study of soil conditions affecting emissions of nitrous oxide from packed cores subjected to freezing and thawing. Canadian Journal of Soil Science 91, 223–233.
A laboratory study of soil conditions affecting emissions of nitrous oxide from packed cores subjected to freezing and thawing.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3MXptVWqtbc%3D&md5=5abf833fd1febdcbe6e0364ab2c6fe20CAS |

US-EPA (2006) Global anthropogenic non-CO2 greenhouse gas emissions: 1990–2020. United States Environmental Protection Agency, EPA: Washington, DC.

van Cleemput O, El-Sebaay AS, Baert L (1983) Evolution of gaseous hydrocarbons from soil: Effect of moisture content and nitrate level. Soil Biology & Biochemistry 15, 519–524.
Evolution of gaseous hydrocarbons from soil: Effect of moisture content and nitrate level.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaL28XoslKjug%3D%3D&md5=184c7a6f25598ad58f74d7ef8e19bcdeCAS |

Velthof GL, Kuikman PJ, Oenema O (2002) Nitrous oxide emission from soils amended with crop residues. Nutrient Cycling in Agroecosystems 62, 249–261.
Nitrous oxide emission from soils amended with crop residues.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD38XovFShtr0%3D&md5=995867b9e193812c75688c0a91523109CAS |

Wang J, Zhang M, Xiong Z, Liu P, Pan G (2011) Effects of biochar addition on N2O and CO2 emissions from two paddy soils. Biology and Fertility of Soils 47, 887–896.
Effects of biochar addition on N2O and CO2 emissions from two paddy soils.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3MXhtlCmtbbP&md5=e907c7caa4c0f27e7cf17dfd828afb33CAS |

Wang WJ, Dalal RC, Moody PW, Smith CJ (2003) Relationships of soil respiration to microbial biomass, substrate availability, and clay content. Soil Biology & Biochemistry 35, 273–284.
Relationships of soil respiration to microbial biomass, substrate availability, and clay content.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD3sXhvFSltb8%3D&md5=16ed8b93461d00dc9c997340bf637abaCAS |

Wang Z, Delaune RD, Lindau CW, Patrick WH (1992) Methane production from anaerobic soil amended with rice straw and nitrogen fertilizers. Fertilizer Research 33, 115–121.
Methane production from anaerobic soil amended with rice straw and nitrogen fertilizers.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaK3sXksVymtLY%3D&md5=7672c60ff0947d3095551839abc3d003CAS |

Wang ZP, DeLaune RD, Patrick WH, Masscheleyn PH (1993) Soil redox and pH effects on methane production in a flooded rice soil. Soil Science Society of America Journal 57, 382–385.
Soil redox and pH effects on methane production in a flooded rice soil.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaK2cXns1eksg%3D%3D&md5=594aee522ba593c078730afad331ea99CAS |