Soil type influences the leaching of microbial indicators under natural rainfall following application of dairy shed effluent
Jackie Aislabie A B , Malcolm McLeod A , Janine Ryburn A , Alexandra McGill A and Daniel Thornburrow AA Landcare Research, Private Bag 3127, Hamilton, New Zealand.
B Corresponding author. Email: aislabiej@landcareresearch.co.nz
Soil Research 49(3) 270-279 https://doi.org/10.1071/SR10147
Submitted: 19 July 2010 Accepted: 27 September 2010 Published: 12 April 2011
Abstract
The ability of soil to function as a barrier between microbial pathogens in wastes and groundwater following application of animal wastes is dependent on soil structure. We irrigated soil lysimeters with dairy shed effluent at intervals of 3–4 months and monitored microbial indicators (somatic coliphage, faecal enterococci, Escherichia coli) in soil core leachates for 1 year. The lysimeters were maintained in a lysimeter facility under natural soil temperature and moisture regimes. Microbial indicators were rapidly transported to depth in well-structured Netherton clay loam soil. Peak concentrations of E. coli and somatic coliphage were detected immediately following dairy shed effluent application to Netherton clay loam soil, and E. coli continued to leach from the soil following rainfall. In contrast, microbial indicators were rarely detected in leachates from fine-structured Manawatu sandy loam soil. Potential for leaching was dependent on soil moisture conditions in Manawatu soil but not Netherton soil, where leaching occurred regardless. Dye studies confirmed that E. coli can be transported to depth by flow through continuous macropores in Netherton soils. However, in the main E. coli was retained in topsoil of Netherton and Manawatu soil.
Additional keywords: bypass flow, Escherichia coli, faecal enterococci, Manawatu fine sandy loam, Netherton clay loam, somatic coliphage.
References
Abu-Ashour J, Abu-Zreig M (2005) Effect of interstitial velocity on the adsorption of bacteria onto soil. Adsorption Science and Technology 23, 535–542.| Effect of interstitial velocity on the adsorption of bacteria onto soil.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD28XitFCntbo%3D&md5=7a27f5d184b2054c5905c4f9d9b3f601CAS |
Abu-Ashour J, Joy DM, Lee H, Whiteley HR, Zelin S (1994) Transport of microorganisms through soil. Water, Air, and Soil Pollution 75, 141–158.
| Transport of microorganisms through soil.Crossref | GoogleScholarGoogle Scholar |
Aislabie JM, Fraser RH, Smith J, McLeod M (2001) Leaching of bacterial indicators through four New Zealand soils. Australian Journal of Soil Research 39, 1397–1406.
| Leaching of bacterial indicators through four New Zealand soils.Crossref | GoogleScholarGoogle Scholar |
APHA (1998) ‘Standard methods for the examination of water and waste water.’ 19th edn. (American Public Health Association: Washington, DC)
Artz RRE, Townend J, Brown K, Towers W, Killham K (2005) Soil macropores and compaction control the leaching potential of Eschericha coli O157:H7. Environmental Microbiology 7, 241–248.
| Soil macropores and compaction control the leaching potential of Eschericha coli O157:H7.Crossref | GoogleScholarGoogle Scholar | 15658991PubMed |
Bech TB, Johnsen K, Dalsgaard A, Laegdsmand M, Jacobsen OH, Jacobsen CS (2010) Transport and leaching of Salmonella enterica serovar Typhimurium in loamy and sand soil monoliths with applied liquid manure. Applied and Environmental Microbiology 76, 710–714.
| Transport and leaching of Salmonella enterica serovar Typhimurium in loamy and sand soil monoliths with applied liquid manure.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3cXisVCjs70%3D&md5=4a4593488d81424d9db2fc7ce31336f3CAS | 20023094PubMed |
Blakemore LC, Searle PL, Daly BK (1987) Methods for chemical analysis of soils. New Zealand Soil Bureau Scientific Report 80, Wellington, New Zealand.
Blanco G, Lemus JA, Grande J (2009) Microbial pollution in wildlife: linking agricultural manuring and bacterial antibiotic resistance in red-billed choughs. Environmental Research 109, 405–412.
| Microbial pollution in wildlife: linking agricultural manuring and bacterial antibiotic resistance in red-billed choughs.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD1MXltVynu7c%3D&md5=24b335eddb76c51d1c10ba991770be0dCAS | 19264302PubMed |
Brennan FP, Abram F, Chinalia FA, Richards KG, O’Flaherty V (2010b) Characterization of environmentally persistent Escherichia coli isolates leached from an Irish soil. Applied and Environmental Microbiology 76, 2175–2180.
| Characterization of environmentally persistent Escherichia coli isolates leached from an Irish soil.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3cXltVCrt7c%3D&md5=a2243079a190ce70c20c82f811d7a7b9CAS | 20154122PubMed |
Brennan FP, O’Flaherty V, Kramers G, Grant J, Richards KG (2010a) Long-term persistence and leaching of Escherichia coli in temperate maritime soils. Applied and Environmental Microbiology 76, 1449–1455.
| Long-term persistence and leaching of Escherichia coli in temperate maritime soils.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3cXjsFanu70%3D&md5=c1d5f80832e69e412eb90c90ce7bcee6CAS | 20038692PubMed |
Byappanahalli MN, Whitman RL, Shively DA, Sadowsky MJ, Ishii S (2006) Population structure, persistence, and seasonality of autochthonous Escherichia coli in temperate, coastal forest soil from a Great Lakes watershed. Environmental Microbiology 8, 504–513.
| Population structure, persistence, and seasonality of autochthonous Escherichia coli in temperate, coastal forest soil from a Great Lakes watershed.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD28XjsFOqsbg%3D&md5=a7963df413eff7ec26141aa4a1a17481CAS | 16478456PubMed |
Cowie JD (1978) Soils and agriculture of Kairanga County, North Island, New Zealand. Soil Bureau Bulletin No. 33, Lower Hutt, New Zealand.
Craggs RJ, Sukias JP, Tanner CT, Davies-Colley RJ (2004) Advanced pond systems for dairy-farm effluent treatment. New Zealand Journal of Agricultural Research 47, 449–460.
| Advanced pond systems for dairy-farm effluent treatment.Crossref | GoogleScholarGoogle Scholar |
Dean DM, Foran ME (1992) The effect of farm liquid waste application on tile drainage. Journal of Soil and Water Conservation 47, 368–369.
Donnison A, Ross C (2009) Survival and retention of Escherichia coli O157:H7 and Campylobacter in contrasting soils from the Toenepi catchment. New Zealand Journal of Agricultural Research 52, 133–144.
| Survival and retention of Escherichia coli O157:H7 and Campylobacter in contrasting soils from the Toenepi catchment.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD1MXhtFOju73P&md5=03ff001aea8235fd6ccce8bff3a3abb2CAS |
Gagliardi JV, Karns JS (2000) Leaching of Escherichia coli O157:H7 in diverse soils under various agricultural management practices. Applied and Environmental Microbiology 66, 877–883.
| Leaching of Escherichia coli O157:H7 in diverse soils under various agricultural management practices.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD3cXhsFyrsbg%3D&md5=e10d6a83a1bd0980a0803ab5ab570539CAS | 10698745PubMed |
Gammack SM, Patterson E, Kemp JS, Killham K (1992) Factors affecting the movement of microorganisms in soils. In ‘Soil biochemistry, Volume 7’. (Eds G Stotzky, J-M Bollag) pp. 263–305. (Marcel Dekker: New York)
Hewitt AE (1998) New Zealand Soil Classification. Landcare Research Science Series No. 1. Landcare Research, Lincoln, New Zealand.
Houlbrooke DJ, Horne DJ, Hedley MJ, Hanly JA, Snow VO (2004) A review of literature on the land treatment of farm-dairy effluent in New Zealand and its impact on water quality. New Zealand Journal of Agricultural Research 47, 499–511.
| A review of literature on the land treatment of farm-dairy effluent in New Zealand and its impact on water quality.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD2MXhvFyltbo%3D&md5=5f0822501c8d25da0e0ddc95b4e379beCAS |
Ishii S, Ksoll WB, Hicks RE, Sadowsky MJ (2006) Presence and growth of naturalized Escherichia coli in temperate soils from Lake Superior watersheds. Applied and Environmental Microbiology 72, 612–621.
| Presence and growth of naturalized Escherichia coli in temperate soils from Lake Superior watersheds.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD28XmtFeisQ%3D%3D&md5=ea5d55a0822120745abd79d53dfe1c21CAS | 16391098PubMed |
ISO (1995) Water quality: detection and enumeration of bacteriophages. 1. Enumeration of F-specific RNA bacteriophages. ISO 10705-2. International Organization for Standardization, Geneva, Switzerland.
Jamieson RC, Gordon RJ, Sharples KE, Stratton GW, Madani A (2002) Movement and persistence of faecal bacteria in agricultural soils and subsurface drainage water: a review. Canadian Biosystems Engineering 44, 1.1–1.9.
Jiang S, Buchan GD, Noonan MJ, Smith N, Pang L, Close M (2008) Bacterial leaching from dairy shed effluent applied to a fine sandy loam under irrigated pasture. Australian Journal of Soil Research 46, 552–564.
| Bacterial leaching from dairy shed effluent applied to a fine sandy loam under irrigated pasture.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD1cXht1WmsLrI&md5=dae5d7f524cffb5032bf85297e41101eCAS |
Mawdsley JL, Bardgett RD, Merry RJ, Pain BF, Theodorou MK (1995) Pathogens in livestock waste, their potential for movement through soil and environmental pollution. Applied Soil Ecology 2, 1–15.
| Pathogens in livestock waste, their potential for movement through soil and environmental pollution.Crossref | GoogleScholarGoogle Scholar |
McLeod M (1992) Soils of the Hauraki Plains County, North Island, New Zealand. DSIR Land Resources Scientific Report No. 31, Lower Hutt, New Zealand.
McLeod M, Aislabie JM, Ryburn J, McGill A (2004) Microbial and chemical tracer movement through Granular, Ultic and Recent Soils. New Zealand Journal of Agricultural Research 47, 557–563.
| Microbial and chemical tracer movement through Granular, Ultic and Recent Soils.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD2MXhvFylur4%3D&md5=6fe7b1633cd099c2df0b67b70aa5538aCAS |
McLeod M, Aislabie JM, Ryburn J, McGill A (2008) Regionalizing potential for microbial bypass flow through New Zealand soils. Journal of Environmental Quality 37, 1959–1967.
| Regionalizing potential for microbial bypass flow through New Zealand soils.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD1cXhtFagu7rE&md5=ed93ad573ec55ab009569cb7e7cdae4dCAS | 18689757PubMed |
McLeod M, Aislabie JM, Smith J, Fraser RH, Roberts A, Taylor MD (2001) Viral and chemical tracer movement through contrasting soils. Journal of Environmental Quality 30, 2134–2140.
| Viral and chemical tracer movement through contrasting soils.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD38Xht1Sltrk%3D&md5=2e80d407db7cd53141da448c756456ceCAS | 11790024PubMed |
McLeod M, Schipper LA, Taylor MD (1998) Preferential flow in a well drained and a poorly drained soil under different overhead irrigation regimes. Soil Use and Management 14, 96–100.
| Preferential flow in a well drained and a poorly drained soil under different overhead irrigation regimes.Crossref | GoogleScholarGoogle Scholar |
McMurry SW, Coyne MS, Perfect E (1998) Faecal coliform transport through intact soil blocks amended with poultry manure. Journal of Environmental Quality 27, 86–92.
| Faecal coliform transport through intact soil blocks amended with poultry manure.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaK1cXmtFGjuw%3D%3D&md5=8543ff741c386ab6195af520e88dc19cCAS |
Ministry for the Environment and Ministry of Health (2003) Microbiological water quality guidelines for marine and freshwater recreational areas. Ministry for the Environment and Ministry of Health, Wellington, New Zealand.
Monaghan RM, de Klein CAM, Muirhead RW (2008) Prioritisation of farm scale remediation efforts for reducing losses of nutrients and faecal indicator organisms to waterways: a case study of New Zealand dairy farming. Journal of Environmental Management 87, 609–622.
| Prioritisation of farm scale remediation efforts for reducing losses of nutrients and faecal indicator organisms to waterways: a case study of New Zealand dairy farming.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD1cXotFCqsLg%3D&md5=b146e0fd582cc244d78052cc12d1511cCAS | 18164122PubMed |
Monaghan RM, Smith LC (2004) Minimising surface water pollution resulting from farm-dairy effluent application to mole-pipe drained soils: II. The contribution of preferential flow of effluent to whole-farm pollutant losses in subsurface drainage from a West Otago dairy farm. New Zealand Journal of Agricultural Research 47, 417–428.
| Minimising surface water pollution resulting from farm-dairy effluent application to mole-pipe drained soils: II. The contribution of preferential flow of effluent to whole-farm pollutant losses in subsurface drainage from a West Otago dairy farm.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD2MXhvFyltLo%3D&md5=c429ec5040e7d06e2263e3d76fc71ad9CAS |
Muirhead RW, Littlejohn RP, Bremer PJ (2004) Evaluation of the effectiveness of a commercially available defined substrate medium and enumeration system for measuring Escherichia coli numbers in faeces and soil samples. Letters in Applied Microbiology 39, 383–387.
| Evaluation of the effectiveness of a commercially available defined substrate medium and enumeration system for measuring Escherichia coli numbers in faeces and soil samples.Crossref | GoogleScholarGoogle Scholar | 1:STN:280:DC%2BD2cvkvVCltA%3D%3D&md5=8b0208df03c66260dd0e41013557d207CAS | 15355543PubMed |
Natsch A, Keel C, Troxler J, Zala M, von Albertini N, Défago G (1996) Importance of preferential flow and soil management in vertical transport of a biocontrol strain of Pseudomonas fluorescens in structured field soil. Applied and Environmental Microbiology 62, 33–40.
Powelson DK, Mills AL (2001) Transport of Escherichia coli in sand columns with constant and changing water contents. Journal of Environmental Quality 30, 238–245.
| Transport of Escherichia coli in sand columns with constant and changing water contents.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD3MXhvFSltrs%3D&md5=02e23125a0fb661cd0d7ed46bdb36379CAS | 11215659PubMed |
Ross C, Donnison A (2003) Campylobacter and dairy farm effluent irrigation. New Zealand Journal of Agricultural Research 46, 255–262.
| Campylobacter and dairy farm effluent irrigation.Crossref | GoogleScholarGoogle Scholar |
Saggar S, Bolan NS, Bhandral R, Hedley C, Luo J (2004) A review of emissions of methane, ammonia and nitrous oxide from animal excreta deposition and farm effluent in grazed pastures. New Zealand Journal of Agricultural Research 47, 513–544.
| A review of emissions of methane, ammonia and nitrous oxide from animal excreta deposition and farm effluent in grazed pastures.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD2MXhvFyltbg%3D&md5=f35e6c01d2c7ff976303aa5465ac9e8cCAS |
Saini R, Halverson LJ, Lorimor JC (2003) Rainfall timing and frequency influence on leaching of Escherichia coli RS2G through soil following manure application. Journal of Environmental Quality 32, 1865–1872.
| Rainfall timing and frequency influence on leaching of Escherichia coli RS2G through soil following manure application.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD3sXnsFKmu7k%3D&md5=0ea128a0c5823ae15988e5dff7fb9419CAS | 14535331PubMed |
Sarmah AK, Meyer MT, Boxall AB (2006) A global perspective of the use, sales, exposure pathways, occurrence, fate and effects of veterinary antibiotics (VAs) in the environment. Chemosphere 65, 725–759.
| A global perspective of the use, sales, exposure pathways, occurrence, fate and effects of veterinary antibiotics (VAs) in the environment.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD28XptVGms7Y%3D&md5=1dbcbed5676ab1729e55c0bafe958a73CAS | 16677683PubMed |
Smith MS, Thomas GW, White RE, Ritonga D (1985) Transport of Escherichia coli through intact and disturbed soil columns. Journal of Environmental Quality 14, 87–91.
| Transport of Escherichia coli through intact and disturbed soil columns.Crossref | GoogleScholarGoogle Scholar |
Sparling GP, Barton L, Duncan L, McGill A, Speir TW, Schipper LA, Arnold G, van Schaik A (2006) Nutrient leaching and changes in soil characteristics of four contrasting soils irrigated with secondary-treated municipal wastewater for four years. Australian Journal of Soil Research 44, 107–116.
| Nutrient leaching and changes in soil characteristics of four contrasting soils irrigated with secondary-treated municipal wastewater for four years.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD28XivVSmtr0%3D&md5=20ca9904857551ddf53495873496eb7aCAS |
Stoddard CS, Coyne MS, Grove JH (1998) Faecal bacteria survival and infiltration through a shallow agricultural soil: timing and tillage effects. Journal of Environmental Quality 27, 1516–1523.
| Faecal bacteria survival and infiltration through a shallow agricultural soil: timing and tillage effects.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaK1cXns1entbg%3D&md5=8fbd752b766dea8be900d2a3b902acf7CAS |
Tallon LK, Si BC, Korber D, Guo X (2007) Soil wetting state and preferential transport of Escherichia coli in clay soils. Canadian Journal of Soil Science 87, 61–72.
Topp E, Welsh M, Tien Y-C, Dang A, Lazarovits G, Conn K, Zhu H (2003) Strain-dependent variability in growth and survival of Escherichia coli in agricultural soil. FEMS Microbiology Ecology 44, 303–308.
| Strain-dependent variability in growth and survival of Escherichia coli in agricultural soil.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD3sXjs1Ckur0%3D&md5=29d9d2f1d71664177ab8db59327949abCAS | 19719611PubMed |
Toranzos GA, McFeters GA (1997) Detection of indicator microorganisms in environmental freshwaters and drinking waters. In ‘Manual of environmental microbiology’. (Eds CJ Kurst, GR Knudsen, MJ McInnerney, LD Stetzenbach, MV Walter) pp. 184–194. (American Society for Microbiology: Washington, DC)
Unc A, Goss MJ (2004) Transport of bacteria from manure and protection of water resources. Applied Soil Ecology 25, 1–18.
| Transport of bacteria from manure and protection of water resources.Crossref | GoogleScholarGoogle Scholar |