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Functional Plant Biology Functional Plant Biology Society
Plant function and evolutionary biology
REVIEW

Recent advances in genome editing strategies for balancing growth and defence in sugarcane (Saccharum officinarum)

Maira Tanveer https://orcid.org/0009-0007-6340-3332 A , Zain Ul Abidin A , Hussam F. Najeeb Alawadi B , Ahmad Naeem Shahzad C , Athar Mahmood https://orcid.org/0000-0003-4473-1668 D * , Bilal Ahmad Khan E , Sameer Qari F and Hesham Farouk Oraby https://orcid.org/0000-0003-4675-3297 G H *
+ Author Affiliations
- Author Affiliations

A Department of Botany, University of Agriculture Faisalabad, Faisalabad 38000, Pakistan. Email: mairatanveeruaf@gmail.com, zainmalik8045@gmail.com

B College of Agriculture, Al-Qadisiyah University, Al-Qadisiyah, Iraq. Email: hussam.alawadi@qu.edu.iq

C Department of Agronomy, Bahauddin Zakarriya University, Multan 60650, Pakistan. Email: anaeems@gmail.com

D Department of Agronomy, University of Agriculture Faisalabad, Faisalabad 38000, Pakistan.

E Department of Agronomy, College of Agriculture, University of Sargodha, Sargodha, Pakistan. Email: bilalahmadkhan678@gmail.com

F Department of Biology, Al-Jumum University College, Umm Al-Qura University, Makkah 21955, Saudi Arabia. Email: shqari@uqu.edu.sa

G Deanship of Scientific Research, Umm Al-Qura University, Makkah 21955, Saudi Arabia.

H Department of Crop Science, Faculty of Agriculture, Zagazig University, Zagazig 44519, Egypt.


Handling Editor: Rana Munns

Functional Plant Biology 51, FP24036 https://doi.org/10.1071/FP24036
Submitted: 7 February 2024  Accepted: 14 April 2024  Published: 2 May 2024

© 2024 The Author(s) (or their employer(s)). Published by CSIRO Publishing

Abstract

Sugarcane (Saccharum officinarum) has gained more attention worldwide in recent decades because of its importance as a bioenergy resource and in producing table sugar. However, the production capabilities of conventional varieties are being challenged by the changing climates, which struggle to meet the escalating demands of the growing global population. Genome editing has emerged as a pivotal field that offers groundbreaking solutions in agriculture and beyond. It includes inserting, removing or replacing DNA in an organism’s genome. Various approaches are employed to enhance crop yields and resilience in harsh climates. These techniques include zinc finger nuclease (ZFN), transcription activator-like effector nuclease (TALEN) and clustered regularly interspaced short palindromic repeats/associated protein (CRISPR/Cas). Among these, CRISPR/Cas is one of the most promising and rapidly advancing fields. With the help of these techniques, several crops like rice (Oryza sativa), tomato (Solanum lycopersicum), maize (Zea mays), barley (Hordeum vulgare) and sugarcane have been improved to be resistant to viral diseases. This review describes recent advances in genome editing with a particular focus on sugarcane and focuses on the advantages and limitations of these approaches while also considering the regulatory and ethical implications across different countries. It also offers insights into future prospects and the application of these approaches in agriculture.

Keywords: allelic variants, CRISPR, genomics, NHEJ, sugarcane, TALEN, transgene, zinc finger nuclease.

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