135. GENOME-WIDE ASSOCIATION STUDY IDENTIFIES A LOCUS AT 7p15.2 ASSOCIATED WITH THE DEVELOPMENT OF MODERATE–SEVERE ENDOMETRIOSIS
G. W. Montgomery A , J. N. Painter A , C. A. Anderson B C , D. R. Nyholt A , S. Macgregor A , S. H. Lee A , P. M. Visscher A , P. Kraft D F , N. G. Martin A , A. P. Morris B , S. A. Treloar A E , S. H. Kennedy G , S. A. Missmer D F and K. T. Zondervan B GA Queensland Institute of Medical Research, Brisbane, QLD, Australia.
B Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, United Kingdom.
C Wellcome Trust Sanger Institute, Hinxton, United Kingdom.
D Harvard School of Public Health, Boston, MA, United States.
E Centre for Military and Veterans’ Health, University of Queensland, Bsribane, QLD, Australia.
F Brigham and Women’s Hospital, Boston, MA, United States.
G Nuffield Department of Obstetrics and Gynaecology, University of Oxford, Oxford, UK.
Reproduction, Fertility and Development 22(9) 53-53 https://doi.org/10.1071/SRB10Abs135
Published: 6 September 2010
Abstract
Endometriosis is a common gynaecological disease associated with severe pelvic pain and sub-fertility. There is considerable debate whether different endometriosis stages represent disease progression, or whether moderate-severe (rAFS III/IV) disease is pathological and minimal-mild (rAFS I/II) an epiphenomenon. We conducted a genome-wide association study using 540 082 SNPs in 3194 surgically confirmed endometriosis cases and 7060 controls from Australia and the UK. We used novel statistical methods to estimate the proportion of common variation explained by all markers and performed polygenic predictive modelling for disease stage, both showing significantly increased genetic loading among the 42% of cases with moderate-severe endometriosis. The strongest signals of association were also observed for moderate-severe disease. We subsequently genotyped 72 SNPs in an independent US dataset comprising 2392 endometriosis cases and 1646 controls. An association with rs7798431 on 7p15.2 for moderate-severe endometriosis (P = 6.0 × 10–8, OR = 1.34 (1.21–1.49)) was replicated, reaching combined genome-wide significance (P = 1.7 × 10–9; OR = 1.26 (1.17–1.35)). The implicated inter-genic region involves a 48 kb segment of high LD upstream of plausible candidate genes NFE2L3 and HOXA10. This locus is the first to be robustly implicated in the aetiology of endometriosis, with evidence of association limited to moderate-severe disease.
