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Australian Journal of Zoology Australian Journal of Zoology Society
Evolutionary, molecular and comparative zoology
RESEARCH ARTICLE

Species relationships in the dasyurid marsupial genus Pseudantechinus (Marsupialia : Dasyuridae): a re-examination of the taxonomic status of Pseudantechinus roryi

L. S. Umbrello A , P. A. Woolley B and M. Westerman B C
+ Author Affiliations
- Author Affiliations

A Terrestrial Zoology and Molecular Systematics Unit, Western Australian Museum, Welshpool, WA 6106, Australia and School of Biological Sciences, University of Western Australia, Perth, WA 6009, Australia.

B Department of Ecology, Environment and Evolution, La Trobe University, Melbourne, Vic. 3086, Australia.

C Corresponding author. Email: m.westerman@latrobe.edu.au

Australian Journal of Zoology 65(4) 240-247 https://doi.org/10.1071/ZO17059
Submitted: 20 September 2017  Accepted: 8 December 2017   Published: 9 January 2018

Abstract

The status of Pseudantechinus roryi relative to its congeners has been determined from DNA sequences obtained from both nuclear and mitochondrial gene loci. Although all other recognised species of Pseudantechinus form reciprocally monophyletic lineages in phylogenetic analyses, individuals identified in museum collections as Ps. roryi (including type specimens) were indistinguishable from those identified as Ps. macdonnellensis. Ps. roryi is thus considered to be a synonym of Ps. macdonnellensis. Neighbour-joining network analyses failed to reveal any clear biogeographic differences between populations of Ps. macdonnellensis other than some evidence of isolation by distance.


References

Archer, M. (1982). Review of the dasyurid (Marsupialia) fossil record, integration of data bearing on phylogenetic interpretation and suprageneric classification. In ‘Carnivorous Marsupials. Vol. 2’. (Ed. M. Archer.) pp. 397–443. (Royal Zoological Society of New South Wales: Sydney.)

Baker, A. M. (2015). Family Dasyuridae (Carnivorous Marsupials). In ‘Handbook of the Mammals of the World. Vol. 5. Monotremes and Marsupials’. (Eds D. E. Wilson, and R. A. Mittermeier.) pp. 232–348. (Lynx Edicions: Barcelona.)

Baverstock, P. R., Archer, M., Adams, M., and Richardson, B. J. (1982). Genetic relationships among 32 species of Australian dasyurid marsupials. In ‘Carnivorous Marsupials’. (Ed. M. Archer.) pp. 641–650. (Royal Zoological Society of New South Wales: Sydney.)

Byrne, M., Yeates, D. K., Joseph, L., Kearney, M., Bowler, J., Williams, M. A. J., Cooper, S., Donnellan, S. C., Keogh, J. S., Leys, R., Melville, J., Murphy, D. J., Porch, N., and Wyrwoll, K.-H. (2008). Birth of a biome: insights into the assembly and maintenance of the Australian arid zone biota. Molecular Ecology 17, 4398–4417.
Birth of a biome: insights into the assembly and maintenance of the Australian arid zone biota.Crossref | GoogleScholarGoogle Scholar | 1:STN:280:DC%2BD1cjhvFGruw%3D%3D&md5=7126646dcf63331c07b6be9146c13b4bCAS |

Clement, M., Snell, Q., Walke, P., Posada, D., and Crandall, K. (2002). TCS: estimating gene genealogies. Proceedings of the 16th International Parallel Distributed Processing Symposium, p. 184.

Cooper, D. W., and Woolley, P. A. (1983). Confirmation of a new species of small dasyurid marsupial by electrophoretic analysis of enzymes and proteins. Australian Journal of Zoology 31, 743–751.
Confirmation of a new species of small dasyurid marsupial by electrophoretic analysis of enzymes and proteins.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaL2cXhtFynsLc%3D&md5=8a1c57f42e661c7912f28731a61bc0ceCAS |

Cooper, N. K., Aplin, K. P., and Adams, M. (2000). A new species of false antechinus (Marsupialia: Dasyuromorphia: Dasyuridae) from the Pilbara region, Western Australia. Records of the Western Australian Museum 20, 115–136.

Flot, J. F. (2010). SeqPHASE: a web tool for interconverting PHASE input/output files and FASTA sequence alignments. Molecular Ecology Resources 10, 162–166.
SeqPHASE: a web tool for interconverting PHASE input/output files and FASTA sequence alignments.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3cXht1ansLc%3D&md5=332d9b8b5033aac60c6022b059eca333CAS |

Johnson, D. H. (1954). A new marsupial of the genus Antechinus from northern Australia. Proceedings of the Biological Society of Washington 67, 77–79.

Katoh, K., Misawa, K., Kuma, K., and Miyata, T. (2002). MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Research 30, 3059–3066.
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD38XlslOqu7s%3D&md5=a74b2dad6c05bbeebd2725582dbdba56CAS |

Kearse, M., Moir, R., Wilson, A., Stones-Havas, S., Cheung, M., Sturrock, S., Buxton, S., Cooper, A., Markowitz, S., Duran, C., Thierer, T., Ashton, B., Meintjes, P., and Drummond, A. (2012). Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics 28, 1647–1649.
Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data.Crossref | GoogleScholarGoogle Scholar |

Kishino, H., and Hasegawa, M. (1989). Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea. Journal of Molecular Evolution 29, 170–179.
Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaL1MXkvFCnsbc%3D&md5=95cd3fa7a90f5c791d1f119b2bb71c96CAS |

Kitchener, D. J. (1988). A new species of false antechinus (Marsupialia: Dasyuridae) from the Kimberley, Western Australia. Records of the Western Australian Museum 14, 61–71.

Kitchener, D. J. (1991). Pseudantechinus mimulus (Thomas, 1906) (Marsupialia: Dasyuridae): rediscovery and redescription. Records of the Western Australian Museum 15, 191–202.

Kitchener, D. J., and Caputi, N. (1988). A new species of false antechinus (Marsupialia, Dasyuridae) from Western Australia, with remarks on the generic classification within the Parantechini. Records of the Western Australian Museum 14, 35–59.

Krajewski, C., Blacket, M., Buckley, L., and Westerman, M. (1997). A multigene assessment of phylogenetic relationships in the dasyurid marsupial subfamily Sminthopsinae. Molecular Phylogenetics and Evolution 8, 236–248.
A multigene assessment of phylogenetic relationships in the dasyurid marsupial subfamily Sminthopsinae.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaK2sXmsVamu7o%3D&md5=5d733ed547e30030ad5b82b151607eeaCAS |

Krajewski, C., Moyer, G. R., Sipiorski, J. T., Fain, M. G., and Westerman, M. (2004). Molecular systematics of the enigmatic ‘phascolosoricine’ marsupials of New Guinea. Australian Journal of Zoology 52, 389–415.
Molecular systematics of the enigmatic ‘phascolosoricine’ marsupials of New Guinea.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD2cXntlyju7k%3D&md5=d30b5f538267a98a77d2d2164ab3fc9aCAS |

Mahney, T., Young, S., Brennan, K., Fegan, M., Trikojus, N., Ansell, S., Daly, D., Daly, J., and Long, J. (2012). Fish River Station Biological Survey 2011. Unpublished report. Department of Natural Resources, Environment, the Arts and Sport, Northern Territory Government.

Pepper, M., Doughty, P., and Keogh, J. S. (2013). Geodiversity and endemism in the iconic Australian Pilbara region: a review of landscape evolution and biotic response in an ancient refugium. Journal of Biogeography 40, 1225–1239.
Geodiversity and endemism in the iconic Australian Pilbara region: a review of landscape evolution and biotic response in an ancient refugium.Crossref | GoogleScholarGoogle Scholar |

Posada, D (2008). jModelTest: Phylogenetic model averaging. Molecular Biology and Evolution 25, 1253–1256.
| 1:CAS:528:DC%2BD1cXotlKgsb4%3D&md5=9131d5441c45acb6644fe94acd842622CAS |

Ronquist, F., Teslenko, M., van der Mark, P., Ayres, D. L., Darling, A., Hohna, S., Larget, B., Liu, L., Suchard, M. A., and Huelsenbeck, J. (2012). MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61, 539–542.
MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space.Crossref | GoogleScholarGoogle Scholar |

Shimodaira, H., and Hasegawa, M. (1999). Multiple comparisons of log-likelihood with applications to phylogenetic inference. Molecular Biology and Evolution 16, 1114–1116.
Multiple comparisons of log-likelihood with applications to phylogenetic inference.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaK1MXltVyksrg%3D&md5=2906e87da678f3356025071d75019636CAS |

Stamatakis, A. (2006). RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22, 2688–2690.
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD28XhtFKlsbfI&md5=ed2d9007b555e0e73cd7ef467eb7cfe5CAS |

Stephens, M., Smith, N. J., and Donnelly, P. (2001). A new statistical method for haplotype reconstruction from population data. American Journal of Human Genetics 68, 978–989.
A new statistical method for haplotype reconstruction from population data.Crossref | GoogleScholarGoogle Scholar | 1:STN:280:DC%2BD3M3kslWgsA%3D%3D&md5=1648511493f8057d0c604683301222c2CAS |

Swofford, D. L. (2002). ‘PAUP* version 4.0b10.’ (Sinauer: Sunderland, MA.)

Tate, G. H. H. (1947). Results of the Archbold Expeditions. No. 56. On the anatomy and classification of the Dasyuridae (Marsupialia). Bulletin of the American Museum of Natural History 88, 97–156.

Westerman, M., Young, J., Donnellan, S., Woolley, P. A., and Krajewski, C. (2006). Molecular relationships of New Guinean three-striped dasyures (Myoictis, Marsupialia: Dasyuridae). Journal of Mammalian Evolution 13, 211–222.
Molecular relationships of New Guinean three-striped dasyures (Myoictis, Marsupialia: Dasyuridae).Crossref | GoogleScholarGoogle Scholar |

Westerman, M., Young, J., and Krajewski, C. (2008). Molecular relationships of species of Pseudantechinus, Parantechinus and Dasykaluta (Marsupialia: Dasyuridae). Australian Mammalogy 29, 201–212.

Westerman, M., Blacket, M. J., Hintz, A., Armstrong, K., Woolley, P. A., and Krajewski, C. (2016a). A plethora of planigales: genetic variability and cryptic species in a genus of dasyurid marsupials from northern Australia. Australian Journal of Zoology 64, 303–311.
A plethora of planigales: genetic variability and cryptic species in a genus of dasyurid marsupials from northern Australia.Crossref | GoogleScholarGoogle Scholar |

Westerman, M., Krajewski, C., Kear, B. P., Meehan, L., Meredith, R. W., Emerling, C. A., and Springer, M. S. (2016b). Phylogenetic relationships of dasyuromorphian marsupials revisited. Zoological Journal of the Linnean Society 176, 686–701.
Phylogenetic relationships of dasyuromorphian marsupials revisited.Crossref | GoogleScholarGoogle Scholar |

Williams, M. A. J. (1984). Cenozoic evolution of arid Australia. In ‘Arid Australia: Proceedings of a Symposium on the Origins, Biota and Ecology of Australia’s Arid Regions’. (Eds H. G. Cogger and E. E. Cameron.) pp. 59–78. (Australian Museum: Sydney.)

Woolley, P. A. (1982). Phallic morphology of the Australian species of Antechinus (Dasyuridae, Marsupialia): a new taxonomic tool? In ‘Carnivorous Marsupials’. (Ed. M. Archer.) pp. 767–781. (Royal Zoological Society of New South Wales: Sydney.)

Woolley, P. A. (1991). Reproduction in Pseudantechinus macdonnellensis (Marsupialia: Dasyuridae): field and laboratory observations. Wildlife Research 18, 13–25.
Reproduction in Pseudantechinus macdonnellensis (Marsupialia: Dasyuridae): field and laboratory observations.Crossref | GoogleScholarGoogle Scholar |

Woolley, P. A. (2008). Woolley’s pseudantechinus, Pseudantechinus woolleyae. In ‘The Mammals of Australia’. (Eds S. Van Dyck and R. Strahan.) pp. 76–77. (New Holland Publishers: Australia.)

Woolley, P. A. (2011). Pseudantechinus mimulus: a little known dasyurid marsupial. Australian Mammalogy 33, 57–67.
Pseudantechinus mimulus: a little known dasyurid marsupial.Crossref | GoogleScholarGoogle Scholar |

Woolley, P. A., Krajewski, C., and Westerman, M. (2015). Phylogenetic relationships within Dasyurus (Dasyuromorphia: Dasyuridae): quoll systematics based on molecular evidence and male characteristics. Journal of Mammalogy 96, 37–46.
Phylogenetic relationships within Dasyurus (Dasyuromorphia: Dasyuridae): quoll systematics based on molecular evidence and male characteristics.Crossref | GoogleScholarGoogle Scholar |