Quantitative proteomic analysis of heifer serum at the peri-implantation period using two complementary methods
Jimena Inés Ruiz Álvarez A , Juan Manuel Teijeiro A B , Caroline Evans C and Patricia Estela Marini A *A Laboratorio de Medicina Reproductiva, Facultad de Ciencias Bioquímicas y Farmacéuticas, Universidad Nacional de Rosario, Rosario, Argentina.
B Consejo Nacional de Investigaciones Científicas y Técnicas, CONICET, Buenos Aires, Argentina.
C Department Chemical and Biological Engineering, Bioanalytical Facility, University of Sheffield, Sheffield, UK.
Reproduction, Fertility and Development 35(6) 416-421 https://doi.org/10.1071/RD22228
Published online: 27 February 2023
© 2023 The Author(s) (or their employer(s)). Published by CSIRO Publishing
Abstract
Context: Systemic events resulting from mother-embryo relation at the peri-implantation period may result in specific changes to the protein composition of serum and thus provide a source of biomarkers for early detection of pregnancy.
Aims: We set out to use two different quantitative proteomic approaches to test this hypothesis by comparing heifer serum at the peri-implantation period to that from cycling heifers.
Methods: Two-dimensional electrophoresis (2-DE) and isobaric tags were used for relative and absolute quantitation (iTRAQ) of proteins.
Key results: These methods yielded complementary data indicating biomarker candidate proteins.
Conclusions: Different proteomic methods provide different and complementary information that needs to be analysed in order to consider proteins as potential biomarkers.
Implications: In order to characterise the proteome under specific conditions, the use of complementary techniques is advisable.
Keywords: bidimentional electrophoresis, biomarker, cow, iTRAQ, pregnancy, protein, proteome, serum biomarker.
References
Garbayo, JM, Serrano, B, and Lopez-Gatius, F (2008). Identification of novel pregnancy-associated glycoproteins (PAG) expressed by the peri-implantation conceptus of domestic ruminants. Animal Reproduction Science 103, 120–134.| Identification of novel pregnancy-associated glycoproteins (PAG) expressed by the peri-implantation conceptus of domestic ruminants.Crossref | GoogleScholarGoogle Scholar |
Geisert, RD, Ashworth, MD, and Malayer, JR (2003). Expression of inter-alpha-trypsin inhibitor heavy chains in endometrium of cyclic and pregnant gilts. Reproduction 126, 621–627.
| Expression of inter-alpha-trypsin inhibitor heavy chains in endometrium of cyclic and pregnant gilts.Crossref | GoogleScholarGoogle Scholar |
Green, JA, Xie, S, Quan, X, Bao, B, Gan, X, Mathialagan, N, Beckers, J-F, and Roberts, R (2000). Pregnancy-associated bovine and ovine glycoproteins exhibit spatially and temporally distinct expression patterns during pregnancy. Biology of Reproduction 62, 1624–1631.
| Pregnancy-associated bovine and ovine glycoproteins exhibit spatially and temporally distinct expression patterns during pregnancy.Crossref | GoogleScholarGoogle Scholar |
Jaśkowski, BM, Herudzińska, M, Gehrke, M, and Niżański, W (2021). The impact of the cavitary corpus luteum on the blood progesterone concentration and pregnancy rate of embryo recipient heifers. Theriogenology 178, 73–76.
| The impact of the cavitary corpus luteum on the blood progesterone concentration and pregnancy rate of embryo recipient heifers.Crossref | GoogleScholarGoogle Scholar |
Kusama, K, Bai, R, Matsuno, Y, Ideta, A, Sakurai, T, Nagaoka, K, Hori, M, and Imakawa, K (2022). Characterization of serum metabolome and proteome profiles identifies SNX5 specific for pregnancy failure in Holstein Heifers. Life 12, 309–320.
| Characterization of serum metabolome and proteome profiles identifies SNX5 specific for pregnancy failure in Holstein Heifers.Crossref | GoogleScholarGoogle Scholar |
Middleton, EL, and Pursley, JR (2019). Short communication: Blood samples before and after embryonic attachment accurately determine non-pregnant lactating dairy cows at 24 d post-artificial insemination using a commercially available assay for pregnancy-specific protein B. Journal of Dairy Science 102, 7570–7575.
| Short communication: Blood samples before and after embryonic attachment accurately determine non-pregnant lactating dairy cows at 24 d post-artificial insemination using a commercially available assay for pregnancy-specific protein B.Crossref | GoogleScholarGoogle Scholar |
Ow, SY, Salim, M, Noirel, J, Evans, C, Rehman, I, and Wright, PC (2009). iTRAQ underestimation in simple and complex mixtures: “the good, the bad and the ugly”. Journal of Proteome Research 8, 5347–5355.
| iTRAQ underestimation in simple and complex mixtures: “the good, the bad and the ugly”.Crossref | GoogleScholarGoogle Scholar |
Pohler, KG, Reese, ST, Franco, GA, Oliveira Filho, RV, Paiva, R, Fernandez, L, Melo, Gd, Vasconcelos, JLM, Cooke, R, and Poole, RK (2020). New approaches to diagnose and target reproductive failure in cattle. Animal Reproduction 17, e20200057.
| New approaches to diagnose and target reproductive failure in cattle.Crossref | GoogleScholarGoogle Scholar |
Rawat, P, Bathla, S, Baithalu, R, Yadav, ML, Kumar, S, Ali, SA, Tiwari, A, Lotfan, M, Naru, J, Jena, M, Behere, P, Balhara, AK, Vashisth, R, Singh, I, Dang, A, Kaushik, JK, Mohanty, TK, and Mohanty, AK (2016). Identification of potential protein biomarkers for early detection of pregnancy in cow urine using 2D DIGE and label free quantitation. Clinical Proteomics 13, 15.
| Identification of potential protein biomarkers for early detection of pregnancy in cow urine using 2D DIGE and label free quantitation.Crossref | GoogleScholarGoogle Scholar |
Rehman, I, Evans, CA, Glen, A, Cross, SS, Eaton, CL, Down, J, Pesce, G, Phillips, JT, Yen, OS, Thalmann, GN, Wright, PC, and Hamdy, FC (2012). iTRAQ identification of candidate serum biomarkers associated with metastatic progression of human prostate cancer. PLoS ONE 7, e30885.
| iTRAQ identification of candidate serum biomarkers associated with metastatic progression of human prostate cancer.Crossref | GoogleScholarGoogle Scholar |
Rodríguez-Alonso, B, Maillo, V, Acuña, OS, López-úbeda, R, Torrecillas, A, Simintiras, CA, Sturmey, R, Avilés, M, Lonergan, P, and Rizos, D (2020). Spatial and pregnancy-related changes in the protein, amino acid, and carbohydrate composition of bovine oviduct fluid. International Journal of Molecular Sciences 21, 1681.
| Spatial and pregnancy-related changes in the protein, amino acid, and carbohydrate composition of bovine oviduct fluid.Crossref | GoogleScholarGoogle Scholar |
Song, X, Bandow, J, Sherman, J, Baker, JD, Brown, PW, McDowell, MT, and Molloy, MP (2008). iTRAQ experimental design for plasma biomarker discovery. Journal of Proteome Research 7, 2952–2958.
| iTRAQ experimental design for plasma biomarker discovery.Crossref | GoogleScholarGoogle Scholar |
Szenci, O (2021). Recent possibilities for the diagnosis of early pregnancy and embryonic mortality in dairy cows. Animals 11, 1666.
| Recent possibilities for the diagnosis of early pregnancy and embryonic mortality in dairy cows.Crossref | GoogleScholarGoogle Scholar |
Teijeiro, JM, and Marini, PE (2020). Hormone-regulated PKA activity in porcine oviductal epithelial cells. Cell and Tissue Research 380, 657–667.
| Hormone-regulated PKA activity in porcine oviductal epithelial cells.Crossref | GoogleScholarGoogle Scholar |
Wu, WW, Wang, G, Baek, SJ, and Shen, R-F (2006). Comparative study of three proteomic quantitative methods, DIGE, cICAT, and iTRAQ, using 2D gel- or LC-MALDI TOF/TOF. Journal of Proteome Research 5, 651–658.
| Comparative study of three proteomic quantitative methods, DIGE, cICAT, and iTRAQ, using 2D gel- or LC-MALDI TOF/TOF.Crossref | GoogleScholarGoogle Scholar |