The art of growing plants for experimental purposes: a practical guide for the plant biologist
Hendrik Poorter A J , Fabio Fiorani A , Mark Stitt B , Uli Schurr A , Alex Finck B , Yves Gibon C , Björn Usadel D A , Rana Munns E F , Owen K. Atkin G , François Tardieu H and Thijs L. Pons IA Plant Sciences (IBG-2), Forschungszentrum Jülich, D-52425 Jülich, Germany.
B Max Planck Institute of Molecular Plant Physiology, Am Mühlenberg 1, D-14476 Golm, Germany.
C INRA, Univ. Bordeaux, UMR1332 Biologie du Fruit et Pathologie, 71 Avenue Edouard Bourlaux, F-33883 Villenave d’Ornon, France.
D RWTH Aachen, Worringer Weg 1, 52074 Aachen, Germany.
E CSIRO Plant Industry, GPO Box 1600, Canberra, ACT 2601, Australia.
F School of Plant Biology, University of Western Australia, Crawley, WA 6009, Australia.
G Division of Plant Sciences, Research School of Biology, Australian National University, Canberra, ACT 0200, Australia.
H INRA, Laboratoire d’Ecophysiologie des Plantes sous Stress Environnementaux, 2 Place Viala, F-34820 Montpellier, France.
I Institute of Environmental Biology, Utrecht University, PO Box 800.84, 3508 TB Utrecht, The Netherlands.
J Corresponding author. Email: h.poorter@fz-juelich.de
Functional Plant Biology 39(11) 821-838 https://doi.org/10.1071/FP12028
Submitted: 24 January 2012 Accepted: 19 March 2012 Published: 15 June 2012
Journal Compilation © CSIRO Publishing 2012 Open Access CC BY-NC-ND
Abstract
Every year thousands of experiments are conducted using plants grown under more-or-less controlled environmental conditions. The aim of many such experiments is to compare the phenotype of different species or genotypes in a specific environment, or to study plant performance under a range of suboptimal conditions. Our paper aims to bring together the minimum knowledge necessary for a plant biologist to set up such experiments and apply the environmental conditions that are appropriate to answer the questions of interest. We first focus on the basic choices that have to be made with regard to the experimental setup (e.g. where are the plants grown; what rooting medium; what pot size). Second, we present practical considerations concerning the number of plants that have to be analysed considering the variability in plant material and the required precision. Third, we discuss eight of the most important environmental factors for plant growth (light quantity, light quality, CO2, nutrients, air humidity, water, temperature and salinity); what critical issues should be taken into account to ensure proper growth conditions in controlled environments and which specific aspects need attention if plants are challenged with a certain a-biotic stress factor. Finally, we propose a simple checklist that could be used for tracking and reporting experimental conditions.
Additional keywords: controlled experiments, environmental conditions, glasshouse, growth chamber, plant growth, stress.
References
Annicchiarico P (2002) Genotype × environment interaction: challenges and opportunities for plant breeding and cultivar recommendations. FAO Plant Production and Protection Paper 174.Atkin OK, Loveys BR, Atkinson LJ, Pons TL (2006) Phenotypic plasticity and growth temperature: understanding interspecific variability. Journal of Experimental Botany 57, 267–281.
| Phenotypic plasticity and growth temperature: understanding interspecific variability.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD28XisFKnsg%3D%3D&md5=bc8d68dea1808b40ff98b85be7d7dd3fCAS |
Berry WL, Knight S (1997) Plant culture in hydroponics. In ‘Plant growth chamber handbook’. (Eds RW Langhans, TW Tibbitts) pp. 119–131. (Iowa State University: Ames, IA)
Berry JA, Raison JK (1981) Responses of macrophytes to temperature. In ‘Physiological plant ecology I. Responses to the physical environment’. (Eds OL Lange, PS Nobel, CB Osmond, H Ziegler) pp. 277–338. (Springer-Verlag: Berlin)
Björn LO, Vogelmann TC (1994) Quantification of light. In ‘Photomorphogenesis in plants’. 2nd edn. (Eds RE Kendrick, GHM Kronenberg) pp. 17–25. (Kluwer Academic Publishers: Dordrecht, The Netherlands)
Brockwell J, Gault RR (1976) Effects of irrigation water temperature on growth of some legume species in glasshouses. Australian Journal of Experimental Agriculture and Animal Husbandry 16, 500–505.
| Effects of irrigation water temperature on growth of some legume species in glasshouses.Crossref | GoogleScholarGoogle Scholar |
Campbell CD, Sage RF, Kocacinar F, Way DA (2005) Estimation of the whole-plant CO2 compensation point of tobacco (Nicotiana tabacum L.) Global Change Biology 11, 1956–1967.
Chaves MM, Oliveira MM (2004) Mechanisms underlying plant resilience to water deficits: prospects for water-saving agriculture. Journal of Experimental Botany 55, 2365–2384.
| Mechanisms underlying plant resilience to water deficits: prospects for water-saving agriculture.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD2cXovVOisr0%3D&md5=8510308201fe996b0f6a03f35fe0ccd7CAS |
Cooper A (1976) ‘Nutrient film technique of growing crops’. (Grower Books: London)
Cooper AJ (1979) ‘The ABC of NFT.’ (Grower Books: London)
Cummings IG, Reid JB, Koutoulis A (2007) Red to far-red ratio correction in plant growth chambers – growth responses and influences of thermal load on garden pea. Physiologia Plantarum 131, 171–179.
Drummond C (2009) Replicability is not reproducibility: nor is it good science. Proceedings of the Evaluation Methods for Machine Learning Workshop 26th International Conference for Machine Learning, Montreal, Quebec, Canada.
Epstein E (1994) The anomaly of silicon in plant biology. Proceedings of the National Academy of Sciences of the United States of America 91, 11–17.
| The anomaly of silicon in plant biology.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaK2cXntlehtA%3D%3D&md5=68ed3224c3c68bedb831852c505366a8CAS |
Evans JR, Poorter H (2001) Photosynthetic acclimation of plants to growth irradiance: the relative importance of specific leaf area and nitrogen partitioning in maximizing carbon gain. Plant, Cell & Environment 24, 755–767.
| Photosynthetic acclimation of plants to growth irradiance: the relative importance of specific leaf area and nitrogen partitioning in maximizing carbon gain.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD3MXmsFCmurk%3D&md5=d5d21e3a2db4c2e5a3f591a51060bfbbCAS |
Evans JR, von Caemmerer S, Adams WWI (Eds) (1988) ‘Ecology of photosynthesis in sun and shade.’ (CSIRO Publishing: Melbourne)
Fernández RJ, Reynolds JF (2000) Potential growth and drought tolerance of eight desert grasses: lack of a trade-off? Oecologia 123, 90–98.
| Potential growth and drought tolerance of eight desert grasses: lack of a trade-off?Crossref | GoogleScholarGoogle Scholar |
Fiorani F, Jahnke S, Rascher U, Schurr U (2012) Imaging plants dynamics in heterogenic environments. Current Opinion in Biotechnology
| Imaging plants dynamics in heterogenic environments.Crossref | GoogleScholarGoogle Scholar | in press
Fitter AH, Hay RKM (2002) ‘Environmental physiology of plants.’ (Academic Press: London)
Flitcroft ID, Ingram KT (2002) Controlling CO2 in a commercial controlled environment plant growth chamber. International Journal of Biotronics 31, 73–84.
Flowers TJ, Colmer TD (2008) Salinity tolerance in halophytes. New Phytologist 179, 945–963.
| Salinity tolerance in halophytes.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD1cXhtFWqur%2FE&md5=72b4deb297e7aba3822bd35460a0cbe9CAS |
Forde BG (2002) Local and long-range signaling pathways regulating plant responses to nitrate. Annual Review of Plant Biology 53, 203–224.
| Local and long-range signaling pathways regulating plant responses to nitrate.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD38XlsVWhtbk%3D&md5=6c5f219caf5e774799cb4768a0811ad4CAS |
Franklin KA (2008) Shade avoidance. New Phytologist 179, 930–944.
| Shade avoidance.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD1cXhtFWqur%2FK&md5=af57afbaf76617055189820bb1fc6fbdCAS |
Freijsen AHJ, Otten H (1984) The effect of nitrate concentration in a flowing solution system on growth and nitrate uptake of two Plantago species. Plant and Soil 77, 159–169.
| The effect of nitrate concentration in a flowing solution system on growth and nitrate uptake of two Plantago species.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaL2cXktVKju7g%3D&md5=a593b9773cc81db40848e38b03fe840fCAS |
Füllner K, Temperton VM, Rascher U, Jahnke S, Rist R, Schurr U, Kuhn AJ (2012) Vertical gradient in soil temperature stimulates development and increases biomass accumulation in barley. Plant, Cell & Environment
| Vertical gradient in soil temperature stimulates development and increases biomass accumulation in barley.Crossref | GoogleScholarGoogle Scholar | In press.
Garnier E, Freijsen AHJ (1994) On ecological inference from laboratory experiments conducted under optimum conditions. In ‘A whole-plant perspective on carbon-nitrogen interactions’. (Eds J Roy, E Garnier) pp. 267–292. (SPB Academic Publishing: The Hague, The Netherlands)
Geiger M, Haake V, Ludewig F, Sonnewald U, Stitt M (1999) Influence of nitrate and ammonium nitrate supply on the response of photosynthesis, carbon and nitrogen metabolism, and growth to elevated carbon dioxide in tobacco. Plant, Cell & Environment 22, 1177–1199.
| Influence of nitrate and ammonium nitrate supply on the response of photosynthesis, carbon and nitrogen metabolism, and growth to elevated carbon dioxide in tobacco.Crossref | GoogleScholarGoogle Scholar |
Ghars MA, Parre E, Debez A, Bordenave M, Richard L, Leport L, Bouchereau A, Savouré A, Abdelly C (2008) Comparative salt tolerance analysis between Arabidopsis thaliana and Thellungiella halophila, with special emphasis on K+/Na+ selectivity and proline accumulation. Journal of Plant Physiology 165, 588–599.
| Comparative salt tolerance analysis between Arabidopsis thaliana and Thellungiella halophila, with special emphasis on K+/Na+ selectivity and proline accumulation.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD1cXls1Wgsr8%3D&md5=7247b0d3fe646376c641f3a7aa45cbbfCAS |
Gorbe E, Calatayud A (2010) Optimization of nutrition in soilless systems: a review. Advances in Botanical Research 53, 193–245.
| Optimization of nutrition in soilless systems: a review.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3cXovV2nsbo%3D&md5=69191cf55efd1638f91d4f496f11c7cfCAS |
Granier C, Tardieu F (1998) Is thermal time adequate for expressing the effects of temperature on sunflower leaf development? Plant, Cell & Environment 21, 695–703.
| Is thermal time adequate for expressing the effects of temperature on sunflower leaf development?Crossref | GoogleScholarGoogle Scholar |
Granier C, Aguirrezabal L, Chenu K, Cookson SJ, Dauzat M, Hamard P, Thioux JJ, Rolland G, Bouchier-Combaud S, Lebaudy A, Muller B, Simonneau T, Tardieu F (2006) PHENOPSIS, an automated platform for reproducible phenotyping of plant responses to soil water deficit in Arabidopsis thaliana permitted the identification of an accession with low sensitivity to soil water deficit. New Phytologist 169, 623–635.
| PHENOPSIS, an automated platform for reproducible phenotyping of plant responses to soil water deficit in Arabidopsis thaliana permitted the identification of an accession with low sensitivity to soil water deficit.Crossref | GoogleScholarGoogle Scholar |
Grime JP, Hunt R (1975) Relative growth rate: its range and significance in a local flora. Journal of Ecology 63, 393–422.
| Relative growth rate: its range and significance in a local flora.Crossref | GoogleScholarGoogle Scholar |
Groenevelt PG, Grant CD (2004) A new model for the soil–water retention curve that solves the problem of residual water contents. European Journal of Soil Science 55, 479–485.
| A new model for the soil–water retention curve that solves the problem of residual water contents.Crossref | GoogleScholarGoogle Scholar |
Hannemann J, Poorter H, Usadel B, Bläsing OE, Finck A, Tardieu F, Atkin OK, Pons T, Stitt M, Gibon Y (2009) Xeml Lab: a tool that supports the design of experiments at a graphical interface and generates computer-readable metadata files, which capture information about genotypes, growth conditions, environmental perturbations and sampling strategy. Plant, Cell & Environment 32, 1185–1200.
| Xeml Lab: a tool that supports the design of experiments at a graphical interface and generates computer-readable metadata files, which capture information about genotypes, growth conditions, environmental perturbations and sampling strategy.Crossref | GoogleScholarGoogle Scholar |
Hewitt EJ (1966) Sand and water culture methods used in the study of plant nutrition. Technical Communication no. 22. Commonwealth Bureau of Horticulture and Plantation Crops, Great Britain.
Hicklenton PR, Heins RD (1997) Temperature. In ‘Plant growth chamber handbook’. (Eds RW Langhans, TW Tibbitts) pp. 31–41. (Iowa State University: Ames, IA)
Hoagland DR, Snijder WC (1933) Nutrition of strawberry plants under controlled conditions. Proceedings of the American Society for Horticultural Science 30, 288–296.
Hughes AP, Cockshull KE (1971) The variation in response to light intensity and carbon dioxide concentration shown by two cultivars of Chrysanthemum morifolium grown in controlled environments at two times of year. Annals of Botany 35, 933–945.
ICCEG (2004) International Committee for Controlled Environment Guidelines. Minimum guidelines for measuring and reporting environmental parameters for experiments on plants in growth rooms and chambers. Available at http://www.controlledenvironments.org/Guidelines/minimum-guidelines.htm [Accessed 3 January 2012]
Ingestad D (1982) Relative addition rate and external concentration – driving variables used in plant nutrition research. Plant, Cell & Environment 5, 443–453.
| Relative addition rate and external concentration – driving variables used in plant nutrition research.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaL3sXovVWisQ%3D%3D&md5=05b48187d69b82abc36791461f9de8a8CAS |
Ioannides JP, Allison DB, Ball CA, Coulibaly I, Cui X, Culhane AC, Falchi M, Furlanello C, Game L, Jurman G, Mangion J, Mehta T, Nitzberg M, Page GP, Petretto E, van Noort V (2009) Repeatability of published microarray gene expression analyses. Nature Genetics 41, 149–155.
| Repeatability of published microarray gene expression analyses.Crossref | GoogleScholarGoogle Scholar |
Jansen M, Gilmer F, Biskup B, Nagel KA, Rascher U, Fischbach A, Briem S, Dreissen G, Tittmann S, Braun S, De Jaeger I, Metzlaff M, Schurr U, Scharr H, Walter A (2009) Simultaneous phenotyping of leaf growth and chlorophyll fluorescence via GROWSCREEN FLUORO allows detection of stress tolerance in Arabidopsis thaliana and other rosette plants. Functional Plant Biology 36, 902–914.
| Simultaneous phenotyping of leaf growth and chlorophyll fluorescence via GROWSCREEN FLUORO allows detection of stress tolerance in Arabidopsis thaliana and other rosette plants.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD1MXhtlOgs7rF&md5=f5e29447ec332857f8a47803fa405c61CAS |
Jiao YL, Lau OS, Deng XW (2007) Light-regulated transcriptional networks in higher plants. Nature Reviews. Genetics 8, 217–230.
| Light-regulated transcriptional networks in higher plants.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD2sXhslOgtrY%3D&md5=16cd90b78d47fb58a5904e089ef459e9CAS |
Jones HG (1992) ‘Plants and microclimate, a quantitative approach to environmental plant physiology.’ (Cambridge University Press: Cambridge)
Jones HG, Archer N, Rotenberg E, Casa R (2003) Radiation measurement for plant ecophysiology. Journal of Experimental Botany 54, 879–889.
| Radiation measurement for plant ecophysiology.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD3sXivFWms70%3D&md5=f1500c95d4a16b1fe070415d8bae4343CAS |
Juurola E (2003) Biochemical acclimation patterns of Betula pendula and Pinus sylvestris seedlings to elevated carbon dioxide concentrations. Tree Physiology 23, 85–95.
| Biochemical acclimation patterns of Betula pendula and Pinus sylvestris seedlings to elevated carbon dioxide concentrations.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD3sXit1Srsb8%3D&md5=875a3c04b99dec4d2684c74c213f9c48CAS |
Keeling CD, Chin JFS, Whorf TP (1996) Increased activity of northern vegetation inferred from atmospheric CO2 measurements. Nature 382, 146–149.
| Increased activity of northern vegetation inferred from atmospheric CO2 measurements.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaK28XktlSktbg%3D&md5=b5090888e7bba3b285893fee9fcd5d57CAS |
Kilian J, Peschke F, Berendzen KW, Harter K, Wanke D (2012) Prerequisites, performance and profits of transcriptional profiling the abiotic stress response. Biochimica et Biophysica Acta (BBA) – Gene Regulatory Mechanisms 1819, 166–175.
| Prerequisites, performance and profits of transcriptional profiling the abiotic stress response.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC38XhvVWqsL8%3D&md5=80eb2a0d45362a506133c33c6bcb8c02CAS |
Körner C (2006) Plant CO2 responses: an issue of definition, time and resource supply. New Phytologist 172, 393–411.
| Plant CO2 responses: an issue of definition, time and resource supply.Crossref | GoogleScholarGoogle Scholar |
Lambers H, Pons TL, Chapin FS (2008) ‘Plant physiological ecology.’ (Springer-Verlag: Berlin)
Langhans RW, Tibbitts TW (Eds) (1997) ‘Plant growth chamber handbook’ (Iowa State University: Ames, IA)
Larcher W (2003) ‘Physiological plant ecology.’ (Springer-Verlag: Berlin)
Lilley JM, Fukai S (1994) Effect of timing and severity of water deficit on four diverse rice cultivars. II. Physiological responses to soil water deficit. Field Crops Research 37, 215–223.
| Effect of timing and severity of water deficit on four diverse rice cultivars. II. Physiological responses to soil water deficit.Crossref | GoogleScholarGoogle Scholar |
Massa GD, Kim HH, Wheeler RM, Mitchell CA (2008) Plant productivity in response to LED lighting. HortScience 43, 1951–1956.
Massonnet C, Vile D, Fabre J, Hannah MA, Caldana C, Lisec J, Beemster GTS, Meyer RC, Messerli G, Gronlund JT, Perkovic J, Wigmore E, May S, Bevan MW, Meyer C, Díaz SR, Weigel D, Micol JL, Buchanan-Wollaston V, Fiorani F, Walsh S, Rinn B, Gruissem W, Hilson P, Hennig L, Willmitzer L, Granier C (2010) Probing the reproducibility of leaf growth and molecular phenotypes: a comparison of three Arabidopsis accessions cultivated in ten laboratories. Plant Physiology 152, 2142–2157.
| Probing the reproducibility of leaf growth and molecular phenotypes: a comparison of three Arabidopsis accessions cultivated in ten laboratories.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3cXmsVantrw%3D&md5=2075c4f26a95a08d353f63dd12317ee7CAS |
Max JFJ, Schurr U, Tantau HJ, Hofmann T, Ulbrich A (2012) Greenhouse cover technology. Horticultural Reviews 40, in press.
McCree KJ (1972) Test of current definitions of photosynthetically active radiation against leaf photosynthesis data. Agricultural Meteorology 10, 443–453.
| Test of current definitions of photosynthetically active radiation against leaf photosynthesis data.Crossref | GoogleScholarGoogle Scholar |
Miller DM (1987) Errors in the measurement of root pressure and exudation volume flow rate caused by damage during the transfer of unsupported roots between solutions. Plant Physiology 85, 164–166.
| Errors in the measurement of root pressure and exudation volume flow rate caused by damage during the transfer of unsupported roots between solutions.Crossref | GoogleScholarGoogle Scholar | 1:STN:280:DC%2BC3cnhslyisw%3D%3D&md5=73c86cb6986c6727574d39ec56aafbd9CAS |
Morcuende R, Bari RM, Gibon Y, Zheng W, Pant BD, Bläsing O, Usael B, Czechowski T, Udvardi MK, Stitt M, Scheible WR (2007) Genome-wide reprogramming of metabolism, protein synthesis, cellular processes and the regulatory networks of Arabidopsis in response to phosphate. Plant, Cell & Environment 30, 85–112.
| Genome-wide reprogramming of metabolism, protein synthesis, cellular processes and the regulatory networks of Arabidopsis in response to phosphate.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD2sXitVCltb0%3D&md5=18f6f96c914d501080163de7dade3465CAS |
Morison JIL, Gifford RM (1984) Ethylene contamination of CO2 cylinders. Effects on plant growth in CO2 enrichment studies. Plant Physiology 75, 275–277.
Munns R (2002) Comparative physiology of salt and water stress. Plant, Cell & Environment 25, 239–250.
| Comparative physiology of salt and water stress.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD38Xhslakurw%3D&md5=8558cb25c538a179db778e53069617f0CAS |
Munns R, James RA (2003) Screening methods for salinity tolerance: a case study with tetraploid wheat. Plant and Soil 253, 201–218.
| Screening methods for salinity tolerance: a case study with tetraploid wheat.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD3sXltVemsbc%3D&md5=70bdd8fd1e2a3bae5d69458170c6bba7CAS |
Munns R, Tester M (2008) Mechanisms of salinity tolerance. Annual Review of Plant Biology 59, 651–681.
| Mechanisms of salinity tolerance.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD1cXntFaqtrw%3D&md5=74a9a391a4c4a1f572e0302bd42130f5CAS |
Munns R, James RA, Sirault XRR, Furbank RT, Jones HG (2010) New phenotyping methods for screening wheat and barley for beneficial responses to water deficit. Journal of Experimental Botany 61, 3499–3507.
| New phenotyping methods for screening wheat and barley for beneficial responses to water deficit.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3cXhtVert7jJ&md5=626f450aea4d5653be21fc53f83e2d18CAS |
Murashige T, Skoog F (1962) A revised medium for rapid growth and bio assays with tobacco tissue cultures. Physiologia Plantarum 15, 473–497.
| A revised medium for rapid growth and bio assays with tobacco tissue cultures.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaF3sXksFKm&md5=653cbff4216b152d155a6572062308d2CAS |
Passioura JB (2006) The perils of pot experiments. Functional Plant Biology 33, 1075–1079.
| The perils of pot experiments.Crossref | GoogleScholarGoogle Scholar |
Pierik R, Millenaar FF, Peeters AJM, Voesenek LACJ (2005) New perspectives in flooding research: the use of shade avoidance and Arabidopsis thaliana. Annals of Botany 96, 533–540.
| New perspectives in flooding research: the use of shade avoidance and Arabidopsis thaliana.Crossref | GoogleScholarGoogle Scholar |
Poorter H, Pot CS, Lambers H (1988) The effect of an elevated atmospheric CO2 concentration on growth, photosynthesis and respiration of Plantago major. Physiologia Plantarum 73, 553–559.
Poorter H, Garnier E (1996) Plant growth analysis: evaluation of experimental design and computational methods. Journal of Experimental Botany 47, 1343–1351.
| Plant growth analysis: evaluation of experimental design and computational methods.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaK28XmslWlsr4%3D&md5=51a9ae79d56d40042581fe9e6c1ee249CAS |
Poorter H, Navas ML (2003) Plant growth and competition at elevated CO2: on winners, losers and functional groups. New Phytologist 157, 175–198.
| Plant growth and competition at elevated CO2: on winners, losers and functional groups.Crossref | GoogleScholarGoogle Scholar |
Poorter H, Perez-Soba M (2001) The growth response of plants to elevated CO2 under non-optimal environmental conditions. Oecologia 129, 1–20.
| The growth response of plants to elevated CO2 under non-optimal environmental conditions.Crossref | GoogleScholarGoogle Scholar |
Poorter H, Van der Werf A (1998) Is inherent variation in RGR determined by LAR at low irradiance and by NAR at high irradiance? A review of herbaceous species. In ‘Inherent variation in plant growth. Physiological mechanisms and ecological consequences’. (Eds Lambers H, Poorter H, Van Vuuren MMI) pp. 309–336. (Backhuys Publishers: Leiden, The Netherlands)
Poorter H, Remkes C, Lambers H (1990) Carbon and nitrogen economy of 24 wild species differing in relative growth rate. Plant Physiology 94, 621–627.
| Carbon and nitrogen economy of 24 wild species differing in relative growth rate.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaK3MXjsFOi&md5=03f92a1ce561154c21db6dd8b3b48e5dCAS |
Poorter H, Climent J, Van Dusschoten D, Bühler J, Postma J (2012) Pot size matters: a meta-analysis on the effects of rooting volume on plant growth. Functional Plant Biology 39, 839–850.
| Pot size matters: a meta-analysis on the effects of rooting volume on plant growth.Crossref | GoogleScholarGoogle Scholar |
Popper KR (1959) ‘The logic of scientific discovery.’ (Hutchinson: London)
R Development Core Team (2011) R: A language and environment for statistical computing. (R Foundation for Statistical Computing: Vienna, Austria). Available at http://www.R-project.org/
Rajan AK, Blackman GE (1975) Interacting effects of light and day and night temperatures on growth of 4 species in vegetative phase. Annals of Botany 39, 733–743.
Rengasamy P (2006) World salinization with emphasis on Australia. Journal of Experimental Botany 57, 1017–1023.
| World salinization with emphasis on Australia.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD28Xis1Gls74%3D&md5=538b5a4354070d331a8028017afdce46CAS |
Richter SH, Garner JP, Würbel H (2009) Environmental standardization: cure or cause of poor reproducibility in animal experiments? Nature Methods 6, 257–261.
| Environmental standardization: cure or cause of poor reproducibility in animal experiments?Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD1MXjsl2ns7Y%3D&md5=ae5b76f4ee33d9b70b9ea1be5bfb81e5CAS |
Romer M (2001) Carbon dioxide within controlled environments; the commonly neglected variable. In ‘Proceedings of the international conference: controlled environments in the new millennium’. (The John Innes Centre: Norwich, UK)
Römheld V (1991) The role of phytosiderophores in acquisition of iron and other micronutrients in graminaceous species: an ecological approach. Plant and Soil 130, 127–134.
| The role of phytosiderophores in acquisition of iron and other micronutrients in graminaceous species: an ecological approach.Crossref | GoogleScholarGoogle Scholar |
Sadok W, Naudin P, Boussuge B, Muller B, Welcker C, Tardieu F (2007) Leaf growth rate per unit thermal time follows QTL-dependent daily patterns in hundreds of maize lines under naturally fluctuating conditions. Plant, Cell & Environment 30, 135–146.
| Leaf growth rate per unit thermal time follows QTL-dependent daily patterns in hundreds of maize lines under naturally fluctuating conditions.Crossref | GoogleScholarGoogle Scholar |
Sager JC, McFarlane JC (1997) Radiation. In ‘Plant growth chamber handbook’. (Eds RW Langhans, TW Tibbitts) pp. 1–29. (Iowa State University: Ames, IA)
Schortemeyer M, Atkin OA, McFarlene N, Evans JR (1999) The impact of elevated atmospheric CO2 and nitrate supply on growth, biomass allocation, nitrogen partitioning and N2 fixation of Acacia melanoxylon. Australian Journal of Plant Physiology 26, 737–747.
| The impact of elevated atmospheric CO2 and nitrate supply on growth, biomass allocation, nitrogen partitioning and N2 fixation of Acacia melanoxylon.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD3cXlt1Ogtg%3D%3D&md5=94f3e76d0638c0b431c822e5badd0a50CAS |
Schwärzel K, Renger M, Sauerbrey R, Wessolek G (2002) Soil physical characteristics of peat soils. Journal of Plant Nutrition and Soil Science 165, 479–486.
| Soil physical characteristics of peat soils.Crossref | GoogleScholarGoogle Scholar |
Skirycz A, Vandenbroucke K, Clauw P, Maleux K, De Meyer B, Dhondt S, Pucci A, Gonzalez N, Hoeberichts F, Tognetti VB, Galbiati M, Tonelli C, Van Breusegem F, Vuylsteke M, Inzé D (2011) Survival and growth of Arabidopsis plants given limited water are not equal. Nature Biotechnology 29, 212–214.
| Survival and growth of Arabidopsis plants given limited water are not equal.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BC3MXivFWktr8%3D&md5=7f57caa993d48c4bb79cfef0b4ff3bfbCAS |
Smith H ed. (1984) ‘Plants and the daylight spectrum.’ (Academic Press: London)
Spomer LA, Berry WL, Tibbitts TW (1997) Plant culture in solid media. In ‘Plant growth chamber handbook’. (Eds RW Langhans, TW Tibbitts) pp. 105–118. (Iowa State University: Ames, IA)
Stitt M, Hurry V (2002) A plant for all seasons: alterations in photosynthetic carbon metabolism during cold acclimation in Arabidopsis. Current Opinion in Plant Biology 5, 199–206.
| A plant for all seasons: alterations in photosynthetic carbon metabolism during cold acclimation in Arabidopsis.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD38XivVSmur0%3D&md5=089955de538f793d3154419a5ec1d340CAS |
Stitt M, Krapp A (1999) The molecular physiological basis for the interaction between elevated carbon dioxide and nutrients. Plant, Cell & Environment 22, 583–621.
| The molecular physiological basis for the interaction between elevated carbon dioxide and nutrients.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaK1MXksVartLo%3D&md5=45e16e67c9394a58d9bacb93533ee179CAS |
Sulpice R, Pyl ET, Trenkamp S, Steinfath M, Tschoep H, Witucka-Wall H, Gibon Y, Usadel B, Poree F, Piques M, Von Korff M, Steinhauser MC, Guenther M, Hoehne M, Selbig J, Fernie AR, Altmann T, Stitt M (2009) Starch as a major integrator in the regulation of growth in Arabidopsis thaliana. Proceedings of the National Academy of Sciences of the United States of America 104, 4759–4764.
Tardieu F, Simonneau T (1998) Variability among species of stomatal control under fluctuating soil water status and evaporative demand: modelling isohydric and anisohydric behaviours. Journal of Experimental Botany 49, 419–432.
| Variability among species of stomatal control under fluctuating soil water status and evaporative demand: modelling isohydric and anisohydric behaviours.Crossref | GoogleScholarGoogle Scholar |
Tardieu F, Tuberosa R (2010) Dissection and modelling of abiotic stress tolerance in plants. Current Opinion in Plant Biology 13, 206–212.
| Dissection and modelling of abiotic stress tolerance in plants.Crossref | GoogleScholarGoogle Scholar |
Tibbitts TW (1997) Air contaminants. In ‘Plant growth chamber handbook’. (Eds RW Langhans, TW Tibbitts) pp. 81–86. (Iowa State University: Ames, IA)
Usadel B, Gibon Y, Bläsing OE, Poree F, Höhne M, Günter M, Trethewey R, Kamlage B, Poorter H, Stitt M (2008) Multilevel genomics analysis of the response of transcripts, enzyme activities and metabolites in Arabidopsis rosettes to a progressive decrease of the temperature in the non-freezing range. Plant, Cell & Environment 31, 518–547.
| Multilevel genomics analysis of the response of transcripts, enzyme activities and metabolites in Arabidopsis rosettes to a progressive decrease of the temperature in the non-freezing range.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD1cXlt1Cks7g%3D&md5=007ba9909cf348f2ea7d10c4474e1976CAS |
USSL (2011) United States Salinity Laboratory. Prometheus wiki. Available at http://www.publish.csiro.au/prometheuswiki [Accessed 3 January 2012]
Vogel JT, Zarka DG, Van Buskirk HA, Fowler SG, Thomashow MF (2005) Roles of the CBF2 and ZAT12 transcription factors in configuring the low temperature transcriptome of Arabidopsis. The Plant Journal 41, 195–211.
| Roles of the CBF2 and ZAT12 transcription factors in configuring the low temperature transcriptome of Arabidopsis.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD2MXhtVWitrc%3D&md5=0fd6f295979e69cbfbd10e450052e147CAS |
Waisel Y (2002) Aeroponics: a tool for root research under minimal environmental restrictions. In ‘Plant roots, the hidden half’. (Eds Y Waisel, A Eshel, U Kafkaki) pp. 323–332. (Marcel Dekker: New York)
Zhang HM, Forde BG (1998) An Arabidopsis MADS box gene that controls nutrient-induced changes in root architecture. Science 279, 407–409.
| An Arabidopsis MADS box gene that controls nutrient-induced changes in root architecture.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DyaK1cXmsVShtA%3D%3D&md5=a94980fe97fa4a7228721a3f06ac7ea2CAS |
Zhang X, Hause RJ, Borevitz JO (2012) Natural genetic variation for growth and development revealed by high throughput phenotyping in Arabidopsis thaliana. G3 Genetics in press.
Zou F, Xu Z, Vision T (2006) Assessing the significance of quantitative trait loci in replicable mapping populations. Genetics 174, 1063–1068.
| Assessing the significance of quantitative trait loci in replicable mapping populations.Crossref | GoogleScholarGoogle Scholar | 1:CAS:528:DC%2BD28Xht12mur3O&md5=d98f6f8079cb359344d119d287928b2aCAS |